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597 lines
29 KiB
Markdown
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Garbage collector design
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========================
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Abstract
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========
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The main garbage collection algorithm used by CPython is reference counting. The basic idea is
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that CPython counts how many different places there are that have a reference to an
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object. Such a place could be another object, or a global (or static) C variable, or
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a local variable in some C function. When an object’s reference count becomes zero,
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the object is deallocated. If it contains references to other objects, their
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reference counts are decremented. Those other objects may be deallocated in turn, if
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this decrement makes their reference count become zero, and so on. The reference
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count field can be examined using the `sys.getrefcount()` function (notice that the
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value returned by this function is always 1 more as the function also has a reference
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to the object when called):
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```pycon
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>>> x = object()
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>>> sys.getrefcount(x)
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2
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>>> y = x
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>>> sys.getrefcount(x)
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3
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>>> del y
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>>> sys.getrefcount(x)
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2
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```
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The main problem with the reference counting scheme is that it does not handle reference
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cycles. For instance, consider this code:
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```pycon
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>>> container = []
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>>> container.append(container)
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>>> sys.getrefcount(container)
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3
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>>> del container
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```
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In this example, `container` holds a reference to itself, so even when we remove
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our reference to it (the variable "container") the reference count never falls to 0
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because it still has its own internal reference. Therefore it would never be
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cleaned just by simple reference counting. For this reason some additional machinery
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is needed to clean these reference cycles between objects once they become
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unreachable. This is the cyclic garbage collector, usually called just Garbage
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Collector (GC), even though reference counting is also a form of garbage collection.
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Starting in version 3.13, CPython contains two GC implementations:
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- The default build implementation relies on the
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[global interpreter lock](https://docs.python.org/3/glossary.html#term-global-interpreter-lock)
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for thread safety.
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- The free-threaded build implementation pauses other executing threads when
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performing a collection for thread safety.
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Both implementations use the same basic algorithms, but operate on different
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data structures. See the section on
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[Differences between GC implementations](#Differences-between-GC-implementations)
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for the details.
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Memory layout and object structure
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==================================
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The garbage collector requires additional fields in Python objects to support
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garbage collection. These extra fields are different in the default and the
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free-threaded builds.
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GC for the default build
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------------------------
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Normally the C structure supporting a regular Python object looks as follows:
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```
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object -----> +--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ \
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| ob_refcnt | |
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+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ | PyObject_HEAD
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| *ob_type | |
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+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ /
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| ... |
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```
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In order to support the garbage collector, the memory layout of objects is altered
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to accommodate extra information **before** the normal layout:
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```
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+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ \
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| *_gc_next | |
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+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ | PyGC_Head
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| *_gc_prev | |
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object -----> +--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ /
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| ob_refcnt | \
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+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ | PyObject_HEAD
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| *ob_type | |
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+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ /
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| ... |
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```
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In this way the object can be treated as a normal python object and when the extra
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information associated to the GC is needed the previous fields can be accessed by a
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simple type cast from the original object: `((PyGC_Head *)(the_object)-1)`.
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As is explained later in the
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[Optimization: reusing fields to save memory](#optimization-reusing-fields-to-save-memory)
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section, these two extra fields are normally used to keep doubly linked lists of all the
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objects tracked by the garbage collector (these lists are the GC generations, more on
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that in the [Optimization: generations](#Optimization-generations) section), but
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they are also reused to fulfill other purposes when the full doubly linked list
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structure is not needed as a memory optimization.
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Doubly linked lists are used because they efficiently support the most frequently required operations. In
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general, the collection of all objects tracked by GC is partitioned into disjoint sets, each in its own
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doubly linked list. Between collections, objects are partitioned into "generations", reflecting how
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often they've survived collection attempts. During collections, the generation(s) being collected
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are further partitioned into, for example, sets of reachable and unreachable objects. Doubly linked lists
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support moving an object from one partition to another, adding a new object, removing an object
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entirely (objects tracked by GC are most often reclaimed by the refcounting system when GC
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isn't running at all!), and merging partitions, all with a small constant number of pointer updates.
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With care, they also support iterating over a partition while objects are being added to - and
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removed from - it, which is frequently required while GC is running.
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GC for the free-threaded build
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------------------------------
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In the free-threaded build, Python objects contain a 1-byte field
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`ob_gc_bits` that is used to track garbage collection related state. The
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field exists in all objects, including ones that do not support cyclic
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garbage collection. The field is used to identify objects that are tracked
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by the collector, ensure that finalizers are called only once per object,
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and, during garbage collection, differentiate reachable vs. unreachable objects.
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```
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object -----> +--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ \
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| ob_tid | |
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+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ |
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| pad | ob_mutex | ob_gc_bits | ob_ref_local | |
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+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ | PyObject_HEAD
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| ob_ref_shared | |
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+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ |
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| *ob_type | |
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+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+--+ /
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| ... |
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```
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Note that not all fields are to scale. `pad` is two bytes, `ob_mutex` and
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`ob_gc_bits` are each one byte, and `ob_ref_local` is four bytes. The
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other fields, `ob_tid`, `ob_ref_shared`, and `ob_type`, are all
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pointer-sized (that is, eight bytes on a 64-bit platform).
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The garbage collector also temporarily repurposes the `ob_tid` (thread ID)
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and `ob_ref_local` (local reference count) fields for other purposes during
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collections.
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C APIs
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------
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Specific APIs are offered to allocate, deallocate, initialize, track, and untrack
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objects with GC support. These APIs can be found in the
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[Garbage Collector C API documentation](https://docs.python.org/3/c-api/gcsupport.html).
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Apart from this object structure, the type object for objects supporting garbage
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collection must include the `Py_TPFLAGS_HAVE_GC` in its `tp_flags` slot and
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provide an implementation of the `tp_traverse` handler. Unless it can be proven
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that the objects cannot form reference cycles with only objects of its type or unless
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the type is immutable, a `tp_clear` implementation must also be provided.
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Identifying reference cycles
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============================
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The algorithm that CPython uses to detect those reference cycles is
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implemented in the `gc` module. The garbage collector **only focuses**
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on cleaning container objects (that is, objects that can contain a reference
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to one or more objects). These can be arrays, dictionaries, lists, custom
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class instances, classes in extension modules, etc. One could think that
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cycles are uncommon but the truth is that many internal references needed by
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the interpreter create cycles everywhere. Some notable examples:
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- Exceptions contain traceback objects that contain a list of frames that
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contain the exception itself.
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- Module-level functions reference the module's dict (which is needed to resolve globals),
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which in turn contains entries for the module-level functions.
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- Instances have references to their class which itself references its module, and the module
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contains references to everything that is inside (and maybe other modules)
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and this can lead back to the original instance.
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- When representing data structures like graphs, it is very typical for them to
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have internal links to themselves.
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To correctly dispose of these objects once they become unreachable, they need
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to be identified first. To understand how the algorithm works, let’s take
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the case of a circular linked list which has one link referenced by a
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variable `A`, and one self-referencing object which is completely
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unreachable:
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```pycon
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>>> import gc
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>>> class Link:
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... def __init__(self, next_link=None):
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... self.next_link = next_link
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>>> link_3 = Link()
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>>> link_2 = Link(link_3)
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>>> link_1 = Link(link_2)
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>>> link_3.next_link = link_1
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>>> A = link_1
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>>> del link_1, link_2, link_3
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>>> link_4 = Link()
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>>> link_4.next_link = link_4
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>>> del link_4
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# Collect the unreachable Link object (and its .__dict__ dict).
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>>> gc.collect()
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2
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```
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The GC starts with a set of candidate objects it wants to scan. In the
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default build, these "objects to scan" might be all container objects or a
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smaller subset (or "generation"). In the free-threaded build, the collector
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always scans all container objects.
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The objective is to identify all the unreachable objects. The collector does
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this by identifying reachable objects; the remaining objects must be
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unreachable. The first step is to identify all of the "to scan" objects that
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are **directly** reachable from outside the set of candidate objects. These
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objects have a refcount larger than the number of incoming references from
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within the candidate set.
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Every object that supports garbage collection will have an extra reference
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count field initialized to the reference count (`gc_ref` in the figures)
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of that object when the algorithm starts. This is because the algorithm needs
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to modify the reference count to do the computations and in this way the
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interpreter will not modify the real reference count field.
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![gc-image1](images/python-cyclic-gc-1-new-page.png)
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The GC then iterates over all containers in the first list and decrements by one the
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`gc_ref` field of any other object that container is referencing. Doing
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this makes use of the `tp_traverse` slot in the container class (implemented
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using the C API or inherited by a superclass) to know what objects are referenced by
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each container. After all the objects have been scanned, only the objects that have
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references from outside the “objects to scan” list will have `gc_ref > 0`.
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![gc-image2](images/python-cyclic-gc-2-new-page.png)
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Notice that having `gc_ref == 0` does not imply that the object is unreachable.
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This is because another object that is reachable from the outside (`gc_ref > 0`)
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can still have references to it. For instance, the `link_2` object in our example
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ended having `gc_ref == 0` but is referenced still by the `link_1` object that
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is reachable from the outside. To obtain the set of objects that are really
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unreachable, the garbage collector re-scans the container objects using the
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`tp_traverse` slot; this time with a different traverse function that marks objects with
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`gc_ref == 0` as "tentatively unreachable" and then moves them to the
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tentatively unreachable list. The following image depicts the state of the lists in a
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moment when the GC processed the `link_3` and `link_4` objects but has not
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processed `link_1` and `link_2` yet.
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![gc-image3](images/python-cyclic-gc-3-new-page.png)
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Then the GC scans the next `link_1` object. Because it has `gc_ref == 1`,
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the gc does not do anything special because it knows it has to be reachable (and is
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already in what will become the reachable list):
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![gc-image4](images/python-cyclic-gc-4-new-page.png)
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When the GC encounters an object which is reachable (`gc_ref > 0`), it traverses
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its references using the `tp_traverse` slot to find all the objects that are
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reachable from it, moving them to the end of the list of reachable objects (where
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they started originally) and setting its `gc_ref` field to 1. This is what happens
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to `link_2` and `link_3` below as they are reachable from `link_1`. From the
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state in the previous image and after examining the objects referred to by `link_1`
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the GC knows that `link_3` is reachable after all, so it is moved back to the
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original list and its `gc_ref` field is set to 1 so that if the GC visits it again,
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it will know that it's reachable. To avoid visiting an object twice, the GC marks all
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objects that have already been visited once (by unsetting the `PREV_MASK_COLLECTING`
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flag) so that if an object that has already been processed is referenced by some other
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object, the GC does not process it twice.
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![gc-image5](images/python-cyclic-gc-5-new-page.png)
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Notice that an object that was marked as "tentatively unreachable" and was later
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moved back to the reachable list will be visited again by the garbage collector
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as now all the references that that object has need to be processed as well. This
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process is really a breadth first search over the object graph. Once all the objects
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are scanned, the GC knows that all container objects in the tentatively unreachable
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list are really unreachable and can thus be garbage collected.
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Pragmatically, it's important to note that no recursion is required by any of this,
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and neither does it in any other way require additional memory proportional to the
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number of objects, number of pointers, or the lengths of pointer chains. Apart from
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`O(1)` storage for internal C needs, the objects themselves contain all the storage
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the GC algorithms require.
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Why moving unreachable objects is better
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----------------------------------------
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It sounds logical to move the unreachable objects under the premise that most objects
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are usually reachable, until you think about it: the reason it pays isn't actually
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obvious.
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Suppose we create objects A, B, C in that order. They appear in the young generation
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in the same order. If B points to A, and C to B, and C is reachable from outside,
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then the adjusted refcounts after the first step of the algorithm runs will be 0, 0,
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and 1 respectively because the only reachable object from the outside is C.
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When the next step of the algorithm finds A, A is moved to the unreachable list. The
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same for B when it's first encountered. Then C is traversed, B is moved *back* to
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the reachable list. B is eventually traversed, and then A is moved back to the reachable
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list.
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So instead of not moving at all, the reachable objects B and A are each moved twice.
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Why is this a win? A straightforward algorithm to move the reachable objects instead
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would move A, B, and C once each. The key is that this dance leaves the objects in
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order C, B, A - it's reversed from the original order. On all *subsequent* scans,
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none of them will move. Since most objects aren't in cycles, this can save an
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unbounded number of moves across an unbounded number of later collections. The only
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time the cost can be higher is the first time the chain is scanned.
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Destroying unreachable objects
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==============================
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Once the GC knows the list of unreachable objects, a very delicate process starts
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with the objective of completely destroying these objects. Roughly, the process
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follows these steps in order:
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1. Handle and clear weak references (if any). Weak references to unreachable objects
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are set to `None`. If the weak reference has an associated callback, the callback
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is enqueued to be called once the clearing of weak references is finished. We only
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invoke callbacks for weak references that are themselves reachable. If both the weak
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reference and the pointed-to object are unreachable we do not execute the callback.
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This is partly for historical reasons: the callback could resurrect an unreachable
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object and support for weak references predates support for object resurrection.
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Ignoring the weak reference's callback is fine because both the object and the weakref
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are going away, so it's legitimate to say the weak reference is going away first.
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2. If an object has legacy finalizers (`tp_del` slot) move it to the
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`gc.garbage` list.
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3. Call the finalizers (`tp_finalize` slot) and mark the objects as already
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finalized to avoid calling finalizers twice if the objects are resurrected or
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if other finalizers have removed the object first.
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4. Deal with resurrected objects. If some objects have been resurrected, the GC
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finds the new subset of objects that are still unreachable by running the cycle
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detection algorithm again and continues with them.
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5. Call the `tp_clear` slot of every object so all internal links are broken and
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the reference counts fall to 0, triggering the destruction of all unreachable
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objects.
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Optimization: generations
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=========================
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In order to limit the time each garbage collection takes, the GC
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implementation for the default build uses a popular optimization:
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generations. The main idea behind this concept is the assumption that most
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objects have a very short lifespan and can thus be collected soon after their
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creation. This has proven to be very close to the reality of many Python
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programs as many temporary objects are created and destroyed very quickly.
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To take advantage of this fact, all container objects are segregated into
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three spaces/generations. Every new
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object starts in the first generation (generation 0). The previous algorithm is
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executed only over the objects of a particular generation and if an object
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survives a collection of its generation it will be moved to the next one
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(generation 1), where it will be surveyed for collection less often. If
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the same object survives another GC round in this new generation (generation 1)
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it will be moved to the last generation (generation 2) where it will be
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surveyed the least often.
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The GC implementation for the free-threaded build does not use multiple
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generations. Every collection operates on the entire heap.
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In order to decide when to run, the collector keeps track of the number of object
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allocations and deallocations since the last collection. When the number of
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allocations minus the number of deallocations exceeds `threshold_0`,
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collection starts. Initially only generation 0 is examined. If generation 0 has
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been examined more than `threshold_1` times since generation 1 has been
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examined, then generation 1 is examined as well. With generation 2,
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things are a bit more complicated; see
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[Collecting the oldest generation](#Collecting-the-oldest-generation) for
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more information. These thresholds can be examined using the
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[`gc.get_threshold()`](https://docs.python.org/3/library/gc.html#gc.get_threshold)
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function:
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```pycon
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>>> import gc
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>>> gc.get_threshold()
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(700, 10, 10)
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```
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The content of these generations can be examined using the
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`gc.get_objects(generation=NUM)` function and collections can be triggered
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specifically in a generation by calling `gc.collect(generation=NUM)`.
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```pycon
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>>> import gc
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>>> class MyObj:
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... pass
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...
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# Move everything to the last generation so it's easier to inspect
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# the younger generations.
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>>> gc.collect()
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0
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# Create a reference cycle.
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>>> x = MyObj()
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>>> x.self = x
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# Initially the object is in the youngest generation.
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>>> gc.get_objects(generation=0)
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[..., <__main__.MyObj object at 0x7fbcc12a3400>, ...]
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# After a collection of the youngest generation the object
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# moves to the next generation.
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>>> gc.collect(generation=0)
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0
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>>> gc.get_objects(generation=0)
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[]
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>>> gc.get_objects(generation=1)
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[..., <__main__.MyObj object at 0x7fbcc12a3400>, ...]
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```
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Collecting the oldest generation
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--------------------------------
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In addition to the various configurable thresholds, the GC only triggers a full
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collection of the oldest generation if the ratio `long_lived_pending / long_lived_total`
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is above a given value (hardwired to 25%). The reason is that, while "non-full"
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collections (that is, collections of the young and middle generations) will always
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examine roughly the same number of objects (determined by the aforementioned
|
||
thresholds) the cost of a full collection is proportional to the total
|
||
number of long-lived objects, which is virtually unbounded. Indeed, it has
|
||
been remarked that doing a full collection every <constant number> of object
|
||
creations entails a dramatic performance degradation in workloads which consist
|
||
of creating and storing lots of long-lived objects (for example, building a large list
|
||
of GC-tracked objects would show quadratic performance, instead of linear as
|
||
expected). Using the above ratio, instead, yields amortized linear performance
|
||
in the total number of objects (the effect of which can be summarized thusly:
|
||
"each full garbage collection is more and more costly as the number of objects
|
||
grows, but we do fewer and fewer of them").
|
||
|
||
Optimization: reusing fields to save memory
|
||
===========================================
|
||
|
||
In order to save memory, the two linked list pointers in every object with GC
|
||
support are reused for several purposes. This is a common optimization known
|
||
as "fat pointers" or "tagged pointers": pointers that carry additional data,
|
||
"folded" into the pointer, meaning stored inline in the data representing the
|
||
address, taking advantage of certain properties of memory addressing. This is
|
||
possible as most architectures align certain types of data
|
||
to the size of the data, often a word or multiple thereof. This discrepancy
|
||
leaves a few of the least significant bits of the pointer unused, which can be
|
||
used for tags or to keep other information – most often as a bit field (each
|
||
bit a separate tag) – as long as code that uses the pointer masks out these
|
||
bits before accessing memory. For example, on a 32-bit architecture (for both
|
||
addresses and word size), a word is 32 bits = 4 bytes, so word-aligned
|
||
addresses are always a multiple of 4, hence end in `00`, leaving the last 2 bits
|
||
available; while on a 64-bit architecture, a word is 64 bits = 8 bytes, so
|
||
word-aligned addresses end in `000`, leaving the last 3 bits available.
|
||
|
||
The CPython GC makes use of two fat pointers that correspond to the extra fields
|
||
of `PyGC_Head` discussed in the `Memory layout and object structure`_ section:
|
||
|
||
> [!WARNING]
|
||
> Because the presence of extra information, "tagged" or "fat" pointers cannot be
|
||
> dereferenced directly and the extra information must be stripped off before
|
||
> obtaining the real memory address. Special care needs to be taken with
|
||
> functions that directly manipulate the linked lists, as these functions
|
||
> normally assume the pointers inside the lists are in a consistent state.
|
||
|
||
|
||
- The `_gc_prev` field is normally used as the "previous" pointer to maintain the
|
||
doubly linked list but its lowest two bits are used to keep the flags
|
||
`PREV_MASK_COLLECTING` and `_PyGC_PREV_MASK_FINALIZED`. Between collections,
|
||
the only flag that can be present is `_PyGC_PREV_MASK_FINALIZED` that indicates
|
||
if an object has been already finalized. During collections `_gc_prev` is
|
||
temporarily used for storing a copy of the reference count (`gc_ref`), in
|
||
addition to two flags, and the GC linked list becomes a singly linked list until
|
||
`_gc_prev` is restored.
|
||
|
||
- The `_gc_next` field is used as the "next" pointer to maintain the doubly linked
|
||
list but during collection its lowest bit is used to keep the
|
||
`NEXT_MASK_UNREACHABLE` flag that indicates if an object is tentatively
|
||
unreachable during the cycle detection algorithm. This is a drawback to using only
|
||
doubly linked lists to implement partitions: while most needed operations are
|
||
constant-time, there is no efficient way to determine which partition an object is
|
||
currently in. Instead, when that's needed, ad hoc tricks (like the
|
||
`NEXT_MASK_UNREACHABLE` flag) are employed.
|
||
|
||
Optimization: delay tracking containers
|
||
=======================================
|
||
|
||
Certain types of containers cannot participate in a reference cycle, and so do
|
||
not need to be tracked by the garbage collector. Untracking these objects
|
||
reduces the cost of garbage collection. However, determining which objects may
|
||
be untracked is not free, and the costs must be weighed against the benefits
|
||
for garbage collection. There are two possible strategies for when to untrack
|
||
a container:
|
||
|
||
1. When the container is created.
|
||
2. When the container is examined by the garbage collector.
|
||
|
||
As a general rule, instances of atomic types aren't tracked and instances of
|
||
non-atomic types (containers, user-defined objects...) are. However, some
|
||
type-specific optimizations can be present in order to suppress the garbage
|
||
collector footprint of simple instances. Some examples of native types that
|
||
benefit from delayed tracking:
|
||
|
||
- Tuples containing only immutable objects (integers, strings etc,
|
||
and recursively, tuples of immutable objects) do not need to be tracked. The
|
||
interpreter creates a large number of tuples, many of which will not survive
|
||
until garbage collection. It is therefore not worthwhile to untrack eligible
|
||
tuples at creation time. Instead, all tuples except the empty tuple are tracked
|
||
when created. During garbage collection it is determined whether any surviving
|
||
tuples can be untracked. A tuple can be untracked if all of its contents are
|
||
already not tracked. Tuples are examined for untracking in all garbage collection
|
||
cycles. It may take more than one cycle to untrack a tuple.
|
||
|
||
- Dictionaries containing only immutable objects also do not need to be tracked.
|
||
Dictionaries are untracked when created. If a tracked item is inserted into a
|
||
dictionary (either as a key or value), the dictionary becomes tracked. During a
|
||
full garbage collection (all generations), the collector will untrack any dictionaries
|
||
whose contents are not tracked.
|
||
|
||
The garbage collector module provides the Python function `is_tracked(obj)`, which returns
|
||
the current tracking status of the object. Subsequent garbage collections may change the
|
||
tracking status of the object.
|
||
|
||
```pycon
|
||
>>> gc.is_tracked(0)
|
||
False
|
||
>>> gc.is_tracked("a")
|
||
False
|
||
>>> gc.is_tracked([])
|
||
True
|
||
>>> gc.is_tracked({})
|
||
False
|
||
>>> gc.is_tracked({"a": 1})
|
||
False
|
||
>>> gc.is_tracked({"a": []})
|
||
True
|
||
```
|
||
|
||
Differences between GC implementations
|
||
======================================
|
||
|
||
This section summarizes the differences between the GC implementation in the
|
||
default build and the implementation in the free-threaded build.
|
||
|
||
The default build implementation makes extensive use of the `PyGC_Head` data
|
||
structure, while the free-threaded build implementation does not use that
|
||
data structure.
|
||
|
||
- The default build implementation stores all tracked objects in a doubly
|
||
linked list using `PyGC_Head`. The free-threaded build implementation
|
||
instead relies on the embedded mimalloc memory allocator to scan the heap
|
||
for tracked objects.
|
||
- The default build implementation uses `PyGC_Head` for the unreachable
|
||
object list. The free-threaded build implementation repurposes the
|
||
`ob_tid` field to store a unreachable objects linked list.
|
||
- The default build implementation stores flags in the `_gc_prev` field of
|
||
`PyGC_Head`. The free-threaded build implementation stores these flags
|
||
in `ob_gc_bits`.
|
||
|
||
|
||
The default build implementation relies on the
|
||
[global interpreter lock](https://docs.python.org/3/glossary.html#term-global-interpreter-lock)
|
||
for thread safety. The free-threaded build implementation has two "stop the
|
||
world" pauses, in which all other executing threads are temporarily paused so
|
||
that the GC can safely access reference counts and object attributes.
|
||
|
||
The default build implementation is a generational collector. The
|
||
free-threaded build is non-generational; each collection scans the entire
|
||
heap.
|
||
|
||
- Keeping track of object generations is simple and inexpensive in the default
|
||
build. The free-threaded build relies on mimalloc for finding tracked
|
||
objects; identifying "young" objects without scanning the entire heap would
|
||
be more difficult.
|
||
|
||
|
||
> [!NOTE]
|
||
> **Document history**
|
||
>
|
||
> Pablo Galindo Salgado - Original author
|
||
>
|
||
> Irit Katriel - Convert to Markdown
|