// pdfile.cpp /** * Copyright (C) 2008 10gen Inc. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU Affero General Public License, version 3, * as published by the Free Software Foundation. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Affero General Public License for more details. * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see . */ /* todo: _ table scans must be sequential, not next/prev pointers _ coalesce deleted _ disallow system* manipulations from the database. */ #include "stdafx.h" #include "pdfile.h" #include "db.h" #include "../util/mmap.h" #include "../util/hashtab.h" #include "../util/file_allocator.h" #include "../util/processinfo.h" #include "btree.h" #include #include #include "query.h" #include "repl.h" #include "dbhelpers.h" #include "namespace.h" #include "queryutil.h" #include "extsort.h" #include "curop.h" #include "background.h" namespace mongo { map BackgroundOperation::dbsInProg; set BackgroundOperation::nsInProg; bool BackgroundOperation::inProgForDb(const char *db) { assertInWriteLock(); return dbsInProg[db] != 0; } bool BackgroundOperation::inProgForNs(const char *ns) { assertInWriteLock(); return nsInProg.count(ns) != 0; } void BackgroundOperation::assertNoBgOpInProgForDb(const char *db) { uassert(12586, "cannot perform operation: a background operation is currently running for this database", !inProgForDb(db)); } void BackgroundOperation::assertNoBgOpInProgForNs(const char *ns) { uassert(12587, "cannot perform operation: a background operation is currently running for this collection", !inProgForNs(ns)); } BackgroundOperation::BackgroundOperation(const char *ns) : _ns(ns) { assertInWriteLock(); dbsInProg[_ns.db]++; assert( nsInProg.count(_ns.ns()) == 0 ); nsInProg.insert(_ns.ns()); } BackgroundOperation::~BackgroundOperation() { assertInWriteLock(); dbsInProg[_ns.db]--; nsInProg.erase(_ns.ns()); } void BackgroundOperation::dump(stringstream& ss) { if( nsInProg.size() ) { ss << "\nBackground Jobs in Progress\n"; for( set::iterator i = nsInProg.begin(); i != nsInProg.end(); i++ ) ss << " " << *i << '\n'; } for( map::iterator i = dbsInProg.begin(); i != dbsInProg.end(); i++ ) { if( i->second ) ss << "database " << i->first << ": " << i->second << '\n'; } } /* ----------------------------------------- */ string dbpath = "/data/db/"; bool directoryperdb = false; string repairpath; DataFileMgr theDataFileMgr; DatabaseHolder dbHolder; int MAGIC = 0x1000; // int curOp = -2; extern int otherTraceLevel; void addNewNamespaceToCatalog(const char *ns, const BSONObj *options = 0); void ensureIdIndexForNewNs(const char *ns) { if ( ( strstr( ns, ".system." ) == 0 || legalClientSystemNS( ns , false ) ) && strstr( ns, ".$freelist" ) == 0 ){ log( 1 ) << "adding _id index for new collection" << endl; ensureHaveIdIndex( ns ); } } string getDbContext() { stringstream ss; Client * c = currentClient.get(); if ( c ){ Client::Context * cx = c->getContext(); if ( cx ){ Database *database = cx->db(); if ( database ) { ss << database->name << ' '; ss << cx->ns() << ' '; } } } return ss.str(); } BSONObj::BSONObj(const Record *r) { init(r->data, false); } /*---------------------------------------------------------------------*/ int initialExtentSize(int len) { long long sz = len * 16; if ( len < 1000 ) sz = len * 64; if ( sz > 1000000000 ) sz = 1000000000; int z = ((int)sz) & 0xffffff00; assert( z > len ); DEV log() << "initialExtentSize(" << len << ") returns " << z << endl; return z; } bool _userCreateNS(const char *ns, const BSONObj& j, string& err) { if ( nsdetails(ns) ) { err = "collection already exists"; return false; } log(1) << "create collection " << ns << ' ' << j << '\n'; /* todo: do this only when we have allocated space successfully? or we could insert with a { ok: 0 } field and then go back and set to ok : 1 after we are done. */ bool isFreeList = strstr(ns, ".$freelist") != 0; if( !isFreeList ) addNewNamespaceToCatalog(ns, j.isEmpty() ? 0 : &j); long long size = initialExtentSize(128); BSONElement e = j.getField("size"); if ( e.isNumber() ) { size = (long long) e.number(); size += 256; size &= 0xffffffffffffff00LL; } uassert( 10083 , "invalid size spec", size > 0 ); bool newCapped = false; int mx = 0; e = j.getField("capped"); if ( e.type() == Bool && e.boolean() ) { newCapped = true; e = j.getField("max"); if ( e.isNumber() ) { mx = (int) e.number(); } } // $nExtents just for debug/testing. We create '$nExtents' extents, // each of size 'size'. e = j.getField( "$nExtents" ); int nExtents = int( e.number() ); Database *database = cc().database(); if ( nExtents > 0 ) { assert( size <= 0x7fffffff ); for ( int i = 0; i < nExtents; ++i ) { assert( size <= 0x7fffffff ); // $nExtents is just for testing - always allocate new extents // rather than reuse existing extents so we have some predictibility // in the extent size used by our tests database->suitableFile( (int) size )->createExtent( ns, (int) size, newCapped ); } } else { while ( size > 0 ) { int max = MongoDataFile::maxSize() - MDFHeader::headerSize(); int desiredExtentSize = (int) (size > max ? max : size); Extent *e = database->allocExtent( ns, desiredExtentSize, newCapped ); size -= e->length; } if ( !newCapped ) { // check if it's time to preallocate a new file, and if so queue that job for a bg thread // safe to call this multiple times - the implementation will only preallocate one file database->preallocateAFile(); } } NamespaceDetails *d = nsdetails(ns); assert(d); if ( j.getField( "autoIndexId" ).type() ) { if ( j["autoIndexId"].trueValue() ){ ensureIdIndexForNewNs( ns ); } } else { if ( !newCapped ) { ensureIdIndexForNewNs( ns ); } } if ( mx > 0 ) d->max = mx; return true; } // { ..., capped: true, size: ..., max: ... } // returns true if successful bool userCreateNS(const char *ns, BSONObj j, string& err, bool logForReplication) { const char *coll = strchr( ns, '.' ) + 1; massert( 10356 , "invalid ns", coll && *coll ); char cl[ 256 ]; nsToDatabase( ns, cl ); bool ok = _userCreateNS(ns, j, err); if ( logForReplication && ok ) { if ( j.getField( "create" ).eoo() ) { BSONObjBuilder b; b << "create" << coll; b.appendElements( j ); j = b.obj(); } string logNs = string( cl ) + ".$cmd"; logOp("c", logNs.c_str(), j); } return ok; } /*---------------------------------------------------------------------*/ int MongoDataFile::maxSize() { if ( sizeof( int* ) == 4 ) return 512 * 1024 * 1024; else return 0x7ff00000; } int MongoDataFile::defaultSize( const char *filename ) const { int size; if ( fileNo <= 4 ) size = (64*1024*1024) << fileNo; else size = 0x7ff00000; if ( strstr(filename, "_hudsonSmall") ) { int mult = 1; if ( fileNo > 1 && fileNo < 1000 ) mult = fileNo; size = 1024 * 512 * mult; log() << "Warning : using small files for _hudsonSmall" << endl; } else if ( cmdLine.smallfiles ){ size = size >> 2; } return size; } void MongoDataFile::open( const char *filename, int minSize, bool preallocateOnly ) { { /* check quotas very simple temporary implementation - we will in future look up the quota from the grid database */ if ( cmdLine.quota && fileNo > cmdLine.quotaFiles && !boost::filesystem::exists(filename) ) { /* todo: if we were adding / changing keys in an index did we do some work previously that needs cleaning up? Possible. We should check code like that and have it catch the exception and do something reasonable. */ string s = "db disk space quota exceeded "; Database *database = cc().database(); if ( database ) s += database->name; uasserted(12501,s); } } long size = defaultSize( filename ); while ( size < minSize ) { if ( size < maxSize() / 2 ) size *= 2; else { size = maxSize(); break; } } if ( size > maxSize() ) size = maxSize(); assert( ( size >= 64*1024*1024 ) || cmdLine.smallfiles || ( strstr( filename, "_hudsonSmall" ) ) ); assert( size % 4096 == 0 ); if ( preallocateOnly ) { if ( cmdLine.prealloc ) { theFileAllocator().requestAllocation( filename, size ); } return; } header = (MDFHeader *) mmf.map(filename, size); if( sizeof(char *) == 4 ) uassert( 10084 , "can't map file memory - mongo requires 64 bit build for larger datasets", header); else uassert( 10085 , "can't map file memory", header); header->init(fileNo, size); } void addNewExtentToNamespace(const char *ns, Extent *e, DiskLoc eloc, DiskLoc emptyLoc, bool capped) { DiskLoc oldExtentLoc; NamespaceIndex *ni = nsindex(ns); NamespaceDetails *details = ni->details(ns); if ( details ) { assert( !details->lastExtent.isNull() ); assert( !details->firstExtent.isNull() ); e->xprev = details->lastExtent; details->lastExtent.ext()->xnext = eloc; assert( !eloc.isNull() ); details->lastExtent = eloc; } else { ni->add_ns(ns, eloc, capped); details = ni->details(ns); } details->lastExtentSize = e->length; DEBUGGING out() << "temp: newextent adddelrec " << ns << endl; details->addDeletedRec(emptyLoc.drec(), emptyLoc); } Extent* MongoDataFile::createExtent(const char *ns, int approxSize, bool newCapped, int loops) { massert( 10357 , "shutdown in progress", !goingAway ); massert( 10358 , "bad new extent size", approxSize >= 0 && approxSize <= 0x7ff00000 ); massert( 10359 , "header==0 on new extent: 32 bit mmap space exceeded?", header ); // null if file open failed int ExtentSize = approxSize <= header->unusedLength ? approxSize : header->unusedLength; DiskLoc loc; if ( ExtentSize <= 0 ) { /* not there could be a lot of looping here is db just started and no files are open yet. we might want to do something about that. */ if ( loops > 8 ) { assert( loops < 10000 ); out() << "warning: loops=" << loops << " fileno:" << fileNo << ' ' << ns << '\n'; } log() << "newExtent: " << ns << " file " << fileNo << " full, adding a new file\n"; return cc().database()->addAFile( 0, true )->createExtent(ns, approxSize, newCapped, loops+1); } int offset = header->unused.getOfs(); header->unused.setOfs( fileNo, offset + ExtentSize ); header->unusedLength -= ExtentSize; loc.setOfs(fileNo, offset); Extent *e = _getExtent(loc); DiskLoc emptyLoc = e->init(ns, ExtentSize, fileNo, offset); addNewExtentToNamespace(ns, e, loc, emptyLoc, newCapped); DEV log() << "new extent " << ns << " size: 0x" << hex << ExtentSize << " loc: 0x" << hex << offset << " emptyLoc:" << hex << emptyLoc.getOfs() << dec << endl; return e; } Extent* DataFileMgr::allocFromFreeList(const char *ns, int approxSize, bool capped) { string s = cc().database()->name + ".$freelist"; NamespaceDetails *f = nsdetails(s.c_str()); if( f ) { int low, high; if( capped ) { // be strict about the size low = approxSize; if( low > 2048 ) low -= 256; high = (int) (approxSize * 1.05) + 256; } else { low = (int) (approxSize * 0.8); high = (int) (approxSize * 1.4); } if( high < 0 ) high = approxSize; int n = 0; Extent *best = 0; int bestDiff = 0x7fffffff; { DiskLoc L = f->firstExtent; while( !L.isNull() ) { Extent * e = L.ext(); if( e->length >= low && e->length <= high ) { int diff = abs(e->length - approxSize); if( diff < bestDiff ) { bestDiff = diff; best = e; if( diff == 0 ) break; } } L = e->xnext; ++n; } } OCCASIONALLY if( n > 512 ) log() << "warning: newExtent " << n << " scanned\n"; if( best ) { Extent *e = best; // remove from the free list if( !e->xprev.isNull() ) e->xprev.ext()->xnext = e->xnext; if( !e->xnext.isNull() ) e->xnext.ext()->xprev = e->xprev; if( f->firstExtent == e->myLoc ) f->firstExtent = e->xnext; if( f->lastExtent == e->myLoc ) f->lastExtent = e->xprev; // use it OCCASIONALLY if( n > 512 ) log() << "warning: newExtent " << n << " scanned\n"; DiskLoc emptyLoc = e->reuse(ns); addNewExtentToNamespace(ns, e, e->myLoc, emptyLoc, capped); return e; } } return 0; // return createExtent(ns, approxSize, capped); } /*---------------------------------------------------------------------*/ DiskLoc Extent::reuse(const char *nsname) { log(3) << "reset extent was:" << nsDiagnostic.buf << " now:" << nsname << '\n'; massert( 10360 , "Extent::reset bad magic value", magic == 0x41424344 ); xnext.Null(); xprev.Null(); nsDiagnostic = nsname; firstRecord.Null(); lastRecord.Null(); DiskLoc emptyLoc = myLoc; emptyLoc.inc( (extentData-(char*)this) ); int delRecLength = length - (extentData - (char *) this); DeletedRecord *empty1 = (DeletedRecord *) extentData; DeletedRecord *empty = (DeletedRecord *) getRecord(emptyLoc); assert( empty == empty1 ); memset(empty, delRecLength, 1); empty->lengthWithHeaders = delRecLength; empty->extentOfs = myLoc.getOfs(); empty->nextDeleted.Null(); return emptyLoc; } /* assumes already zeroed -- insufficient for block 'reuse' perhaps */ DiskLoc Extent::init(const char *nsname, int _length, int _fileNo, int _offset) { magic = 0x41424344; myLoc.setOfs(_fileNo, _offset); xnext.Null(); xprev.Null(); nsDiagnostic = nsname; length = _length; firstRecord.Null(); lastRecord.Null(); DiskLoc emptyLoc = myLoc; emptyLoc.inc( (extentData-(char*)this) ); DeletedRecord *empty1 = (DeletedRecord *) extentData; DeletedRecord *empty = (DeletedRecord *) getRecord(emptyLoc); assert( empty == empty1 ); empty->lengthWithHeaders = _length - (extentData - (char *) this); empty->extentOfs = myLoc.getOfs(); return emptyLoc; } /* Record* Extent::newRecord(int len) { if( firstEmptyRegion.isNull() ) return 0; assert(len > 0); int newRecSize = len + Record::HeaderSize; DiskLoc newRecordLoc = firstEmptyRegion; Record *r = getRecord(newRecordLoc); int left = r->netLength() - len; if( left < 0 ) { // firstEmptyRegion.Null(); return 0; } DiskLoc nextEmpty = r->next.getNextEmpty(firstEmptyRegion); r->lengthWithHeaders = newRecSize; r->next.markAsFirstOrLastInExtent(this); // we're now last in the extent if( !lastRecord.isNull() ) { assert(getRecord(lastRecord)->next.lastInExtent()); // it was the last one getRecord(lastRecord)->next.set(newRecordLoc); // until now r->prev.set(lastRecord); } else { r->prev.markAsFirstOrLastInExtent(this); // we are the first in the extent assert( firstRecord.isNull() ); firstRecord = newRecordLoc; } lastRecord = newRecordLoc; if( left < Record::HeaderSize + 32 ) { firstEmptyRegion.Null(); } else { firstEmptyRegion.inc(newRecSize); Record *empty = getRecord(firstEmptyRegion); empty->next.set(nextEmpty); // not for empty records, unless in-use records, next and prev can be null. empty->prev.Null(); empty->lengthWithHeaders = left; } return r; } */ /*---------------------------------------------------------------------*/ auto_ptr DataFileMgr::findAll(const char *ns, const DiskLoc &startLoc) { NamespaceDetails * d = nsdetails( ns ); if ( ! d ) return auto_ptr(new BasicCursor(DiskLoc())); DiskLoc loc = d->firstExtent; Extent *e = getExtent(loc); DEBUGGING { out() << "listing extents for " << ns << endl; DiskLoc tmp = loc; set extents; while ( 1 ) { Extent *f = getExtent(tmp); out() << "extent: " << tmp.toString() << endl; extents.insert(tmp); tmp = f->xnext; if ( tmp.isNull() ) break; f = f->getNextExtent(); } out() << endl; d->dumpDeleted(&extents); } if ( d->capped ) return auto_ptr< Cursor >( new ForwardCappedCursor( d , startLoc ) ); if ( !startLoc.isNull() ) return auto_ptr(new BasicCursor( startLoc )); while ( e->firstRecord.isNull() && !e->xnext.isNull() ) { /* todo: if extent is empty, free it for reuse elsewhere. that is a bit complicated have to clean up the freelists. */ RARELY out() << "info DFM::findAll(): extent " << loc.toString() << " was empty, skipping ahead " << ns << endl; // find a nonempty extent // it might be nice to free the whole extent here! but have to clean up free recs then. e = e->getNextExtent(); } return auto_ptr(new BasicCursor( e->firstRecord )); } /* get a table scan cursor, but can be forward or reverse direction. order.$natural - if set, > 0 means forward (asc), < 0 backward (desc). */ auto_ptr findTableScan(const char *ns, const BSONObj& order, const DiskLoc &startLoc) { BSONElement el = order.getField("$natural"); // e.g., { $natural : -1 } if ( el.number() >= 0 ) return DataFileMgr::findAll(ns, startLoc); // "reverse natural order" NamespaceDetails *d = nsdetails(ns); if ( !d ) return auto_ptr(new BasicCursor(DiskLoc())); if ( !d->capped ) { if ( !startLoc.isNull() ) return auto_ptr(new ReverseCursor( startLoc )); Extent *e = d->lastExtent.ext(); while ( e->lastRecord.isNull() && !e->xprev.isNull() ) { OCCASIONALLY out() << " findTableScan: extent empty, skipping ahead" << endl; e = e->getPrevExtent(); } return auto_ptr(new ReverseCursor( e->lastRecord )); } else { return auto_ptr< Cursor >( new ReverseCappedCursor( d, startLoc ) ); } } void printFreeList() { string s = cc().database()->name + ".$freelist"; log() << "dump freelist " << s << '\n'; NamespaceDetails *freeExtents = nsdetails(s.c_str()); if( freeExtents == 0 ) { log() << " freeExtents==0" << endl; return; } DiskLoc a = freeExtents->firstExtent; while( !a.isNull() ) { Extent *e = a.ext(); log() << " " << a.toString() << " len:" << e->length << " prev:" << e->xprev.toString() << '\n'; a = e->xnext; } log() << " end freelist" << endl; } /* drop a collection/namespace */ void dropNS(const string& nsToDrop) { NamespaceDetails* d = nsdetails(nsToDrop.c_str()); uassert( 10086 , (string)"ns not found: " + nsToDrop , d ); BackgroundOperation::assertNoBgOpInProgForNs(nsToDrop.c_str()); NamespaceString s(nsToDrop); assert( s.db == cc().database()->name ); if( s.isSystem() ) { if( s.coll == "system.profile" ) uassert( 10087 , "turn off profiling before dropping system.profile collection", cc().database()->profile == 0 ); else uasserted( 12502, "can't drop system ns" ); } { // remove from the system catalog BSONObj cond = BSON( "name" << nsToDrop ); // { name: "colltodropname" } string system_namespaces = cc().database()->name + ".system.namespaces"; /*int n = */ deleteObjects(system_namespaces.c_str(), cond, false, false, true); // no check of return code as this ns won't exist for some of the new storage engines } // free extents if( !d->firstExtent.isNull() ) { string s = cc().database()->name + ".$freelist"; NamespaceDetails *freeExtents = nsdetails(s.c_str()); if( freeExtents == 0 ) { string err; _userCreateNS(s.c_str(), BSONObj(), err); freeExtents = nsdetails(s.c_str()); massert( 10361 , "can't create .$freelist", freeExtents); } if( freeExtents->firstExtent.isNull() ) { freeExtents->firstExtent = d->firstExtent; freeExtents->lastExtent = d->lastExtent; } else { DiskLoc a = freeExtents->firstExtent; assert( a.ext()->xprev.isNull() ); a.ext()->xprev = d->lastExtent; d->lastExtent.ext()->xnext = a; freeExtents->firstExtent = d->firstExtent; d->firstExtent.setInvalid(); d->lastExtent.setInvalid(); } } // remove from the catalog hashtable cc().database()->namespaceIndex.kill_ns(nsToDrop.c_str()); } void dropCollection( const string &name, string &errmsg, BSONObjBuilder &result ) { log(1) << "dropCollection: " << name << endl; NamespaceDetails *d = nsdetails(name.c_str()); assert( d ); BackgroundOperation::assertNoBgOpInProgForNs(name.c_str()); if ( d->nIndexes != 0 ) { try { assert( dropIndexes(d, name.c_str(), "*", errmsg, result, true) ); } catch( DBException& ) { uasserted(12503,"drop: dropIndexes for collection failed - consider trying repair"); } assert( d->nIndexes == 0 ); } log(1) << "\t dropIndexes done" << endl; result.append("ns", name.c_str()); ClientCursor::invalidate(name.c_str()); Top::global.collectionDropped( name ); dropNS(name); } int nUnindexes = 0; /* unindex all keys in index for this record. */ static void _unindexRecord(IndexDetails& id, BSONObj& obj, const DiskLoc& dl, bool logMissing = true) { BSONObjSetDefaultOrder keys; id.getKeysFromObject(obj, keys); for ( BSONObjSetDefaultOrder::iterator i=keys.begin(); i != keys.end(); i++ ) { BSONObj j = *i; if ( otherTraceLevel >= 5 ) { out() << "_unindexRecord() " << obj.toString(); out() << "\n unindex:" << j.toString() << endl; } nUnindexes++; bool ok = false; try { ok = id.head.btree()->unindex(id.head, id, j, dl); } catch (AssertionException& e) { problem() << "Assertion failure: _unindex failed " << id.indexNamespace() << endl; out() << "Assertion failure: _unindex failed: " << e.what() << '\n'; out() << " obj:" << obj.toString() << '\n'; out() << " key:" << j.toString() << '\n'; out() << " dl:" << dl.toString() << endl; sayDbContext(); } if ( !ok && logMissing ) { out() << "unindex failed (key too big?) " << id.indexNamespace() << '\n'; } } } /* unindex all keys in all indexes for this record. */ static void unindexRecord(NamespaceDetails *d, Record *todelete, const DiskLoc& dl, bool noWarn = false) { BSONObj obj(todelete); int n = d->nIndexes; for ( int i = 0; i < n; i++ ) _unindexRecord(d->idx(i), obj, dl, !noWarn); if( d->backgroundIndexBuildInProgress ) { // always pass nowarn here, as this one may be missing for valid reasons as we are concurrently building it _unindexRecord(d->idx(n), obj, dl, false); } } /* deletes a record, just the pdfile portion -- no index cleanup, no cursor cleanup, etc. caller must check if capped */ void DataFileMgr::_deleteRecord(NamespaceDetails *d, const char *ns, Record *todelete, const DiskLoc& dl) { /* remove ourself from the record next/prev chain */ { if ( todelete->prevOfs != DiskLoc::NullOfs ) todelete->getPrev(dl).rec()->nextOfs = todelete->nextOfs; if ( todelete->nextOfs != DiskLoc::NullOfs ) todelete->getNext(dl).rec()->prevOfs = todelete->prevOfs; } /* remove ourself from extent pointers */ { Extent *e = todelete->myExtent(dl); if ( e->firstRecord == dl ) { if ( todelete->nextOfs == DiskLoc::NullOfs ) e->firstRecord.Null(); else e->firstRecord.setOfs(dl.a(), todelete->nextOfs); } if ( e->lastRecord == dl ) { if ( todelete->prevOfs == DiskLoc::NullOfs ) e->lastRecord.Null(); else e->lastRecord.setOfs(dl.a(), todelete->prevOfs); } } /* add to the free list */ { d->nrecords--; d->datasize -= todelete->netLength(); /* temp: if in system.indexes, don't reuse, and zero out: we want to be careful until validated more, as IndexDetails has pointers to this disk location. so an incorrectly done remove would cause a lot of problems. */ if ( strstr(ns, ".system.indexes") ) { memset(todelete, 0, todelete->lengthWithHeaders); } else { DEV memset(todelete->data, 0, todelete->netLength()); // attempt to notice invalid reuse. d->addDeletedRec((DeletedRecord*)todelete, dl); } } } void DataFileMgr::deleteRecord(const char *ns, Record *todelete, const DiskLoc& dl, bool cappedOK, bool noWarn) { dassert( todelete == dl.rec() ); NamespaceDetails* d = nsdetails(ns); if ( d->capped && !cappedOK ) { out() << "failing remove on a capped ns " << ns << endl; uassert( 10089 , "can't remove from a capped collection" , 0 ); return; } /* check if any cursors point to us. if so, advance them. */ ClientCursor::aboutToDelete(dl); unindexRecord(d, todelete, dl, noWarn); _deleteRecord(d, ns, todelete, dl); NamespaceDetailsTransient::get_w( ns ).notifyOfWriteOp(); } /** Note: if the object shrinks a lot, we don't free up space, we leave extra at end of the record. */ const DiskLoc DataFileMgr::updateRecord( const char *ns, NamespaceDetails *d, NamespaceDetailsTransient *nsdt, Record *toupdate, const DiskLoc& dl, const char *_buf, int _len, OpDebug& debug) { StringBuilder& ss = debug.str; dassert( toupdate == dl.rec() ); BSONObj objOld(toupdate); BSONObj objNew(_buf); DEV assert( objNew.objsize() == _len ); DEV assert( objNew.objdata() == _buf ); if( !objNew.hasElement("_id") && objOld.hasElement("_id") ) { /* add back the old _id value if the update removes it. Note this implementation is slow (copies entire object multiple times), but this shouldn't happen often, so going for simple code, not speed. */ BSONObjBuilder b; BSONElement e; assert( objOld.getObjectID(e) ); b.append(e); // put _id first, for best performance b.appendElements(objNew); objNew = b.obj(); } /* duplicate key check. we descend the btree twice - once for this check, and once for the actual inserts, further below. that is suboptimal, but it's pretty complicated to do it the other way without rollbacks... */ vector changes; getIndexChanges(changes, *d, objNew, objOld); dupCheck(changes, *d, dl); if ( toupdate->netLength() < objNew.objsize() ) { // doesn't fit. reallocate ----------------------------------------------------- uassert( 10003 , "E10003 failing update: objects in a capped ns cannot grow", !(d && d->capped)); d->paddingTooSmall(); if ( cc().database()->profile ) ss << " moved "; deleteRecord(ns, toupdate, dl); return insert(ns, objNew.objdata(), objNew.objsize(), false); } nsdt->notifyOfWriteOp(); d->paddingFits(); /* have any index keys changed? */ { unsigned keyUpdates = 0; int z = d->nIndexesBeingBuilt(); for ( int x = 0; x < z; x++ ) { IndexDetails& idx = d->idx(x); for ( unsigned i = 0; i < changes[x].removed.size(); i++ ) { try { idx.head.btree()->unindex(idx.head, idx, *changes[x].removed[i], dl); } catch (AssertionException&) { ss << " exception update unindex "; problem() << " caught assertion update unindex " << idx.indexNamespace() << endl; } } assert( !dl.isNull() ); BSONObj idxKey = idx.info.obj().getObjectField("key"); keyUpdates += changes[x].added.size(); for ( unsigned i = 0; i < changes[x].added.size(); i++ ) { try { /* we did the dupCheck() above. so we don't have to worry about it here. */ idx.head.btree()->bt_insert( idx.head, dl, *changes[x].added[i], idxKey, /*dupsAllowed*/true, idx); } catch (AssertionException&) { ss << " exception update index "; out() << " caught assertion update index " << idx.indexNamespace() << '\n'; problem() << " caught assertion update index " << idx.indexNamespace() << endl; } } } if( keyUpdates && cc().database()->profile ) ss << '\n' << keyUpdates << " key updates "; } // update in place memcpy(toupdate->data, objNew.objdata(), objNew.objsize()); return dl; } int followupExtentSize(int len, int lastExtentLen) { int x = initialExtentSize(len); int y = (int) (lastExtentLen < 4000000 ? lastExtentLen * 4.0 : lastExtentLen * 1.2); int sz = y > x ? y : x; sz = ((int)sz) & 0xffffff00; assert( sz > len ); return sz; } /* add keys to index idxNo for a new record */ static inline void _indexRecord(NamespaceDetails *d, int idxNo, BSONObj& obj, DiskLoc recordLoc, bool dupsAllowed) { IndexDetails& idx = d->idx(idxNo); BSONObjSetDefaultOrder keys; idx.getKeysFromObject(obj, keys); BSONObj order = idx.keyPattern(); int n = 0; for ( BSONObjSetDefaultOrder::iterator i=keys.begin(); i != keys.end(); i++ ) { if( ++n == 2 ) { d->setIndexIsMultikey(idxNo); } assert( !recordLoc.isNull() ); try { idx.head.btree()->bt_insert(idx.head, recordLoc, *i, order, dupsAllowed, idx); } catch (AssertionException& e) { if( e.code == 10287 && idxNo == d->nIndexes ) { DEV log() << "info: caught key already in index on bg indexing (ok)" << endl; continue; } if( !dupsAllowed ) { // dup key exception, presumably. throw; } problem() << " caught assertion _indexRecord " << idx.indexNamespace() << endl; } } } void testSorting() { BSONObjBuilder b; b.appendNull(""); BSONObj x = b.obj(); BSONObjExternalSorter sorter; sorter.add(x, DiskLoc(3,7)); sorter.add(x, DiskLoc(4,7)); sorter.add(x, DiskLoc(2,7)); sorter.add(x, DiskLoc(1,7)); sorter.add(x, DiskLoc(3,77)); sorter.sort(); auto_ptr i = sorter.iterator(); while( i->more() ) { BSONObjExternalSorter::Data d = i->next(); cout << d.second.toString() << endl; cout << d.first.objsize() << endl; cout<<"SORTER next:" << d.first.toString() << endl; } } // throws DBException unsigned long long fastBuildIndex(const char *ns, NamespaceDetails *d, IndexDetails& idx, int idxNo) { assert( d->backgroundIndexBuildInProgress == 0 ); CurOp * op = cc().curop(); Timer t; log() << "Buildindex " << ns << " idxNo:" << idxNo << ' ' << idx.info.obj().toString() << endl; bool dupsAllowed = !idx.unique(); bool dropDups = idx.dropDups(); BSONObj order = idx.keyPattern(); idx.head.Null(); if ( logLevel > 1 ) printMemInfo( "before index start" ); /* get and sort all the keys ----- */ unsigned long long n = 0; auto_ptr c = theDataFileMgr.findAll(ns); BSONObjExternalSorter sorter(order); sorter.hintNumObjects( d->nrecords ); unsigned long long nkeys = 0; ProgressMeter & pm = op->setMessage( "index: (1/3) external sort" , d->nrecords , 10 ); while ( c->ok() ) { BSONObj o = c->current(); DiskLoc loc = c->currLoc(); BSONObjSetDefaultOrder keys; idx.getKeysFromObject(o, keys); int k = 0; for ( BSONObjSetDefaultOrder::iterator i=keys.begin(); i != keys.end(); i++ ) { if( ++k == 2 ) d->setIndexIsMultikey(idxNo); //cout<<"SORTER ADD " << i->toString() << ' ' << loc.toString() << endl; sorter.add(*i, loc); nkeys++; } c->advance(); n++; pm.hit(); if ( logLevel > 1 && n % 10000 == 0 ){ printMemInfo( "\t iterating objects" ); } }; pm.finished(); if ( logLevel > 1 ) printMemInfo( "before final sort" ); sorter.sort(); if ( logLevel > 1 ) printMemInfo( "after final sort" ); log(t.seconds() > 5 ? 0 : 1) << "\t external sort used : " << sorter.numFiles() << " files " << " in " << t.seconds() << " secs" << endl; list dupsToDrop; /* build index --- */ { BtreeBuilder btBuilder(dupsAllowed, idx); BSONObj keyLast; auto_ptr i = sorter.iterator(); pm = op->setMessage( "index: (2/3) btree bottom up" , nkeys , 10 ); while( i->more() ) { RARELY killCurrentOp.checkForInterrupt(); BSONObjExternalSorter::Data d = i->next(); try { btBuilder.addKey(d.first, d.second); } catch( AssertionException& e ) { if ( dupsAllowed ){ // unknow exception?? throw; } if( e.interrupted() ) throw; if ( ! dropDups ) throw; /* we could queue these on disk, but normally there are very few dups, so instead we keep in ram and have a limit. */ dupsToDrop.push_back(d.second); uassert( 10092 , "too may dups on index build with dropDups=true", dupsToDrop.size() < 1000000 ); } pm.hit(); } pm.finished(); op->setMessage( "index: (3/3) btree-middle" ); log(t.seconds() > 10 ? 0 : 1 ) << "\t done building bottom layer, going to commit" << endl; btBuilder.commit(); wassert( btBuilder.getn() == nkeys || dropDups ); } log(1) << "\t fastBuildIndex dupsToDrop:" << dupsToDrop.size() << endl; for( list::iterator i = dupsToDrop.begin(); i != dupsToDrop.end(); i++ ) theDataFileMgr.deleteRecord( ns, i->rec(), *i, false, true ); return n; } class BackgroundIndexBuildJob : public BackgroundOperation { unsigned long long addExistingToIndex(const char *ns, NamespaceDetails *d, IndexDetails& idx, int idxNo) { bool dupsAllowed = !idx.unique(); bool dropDups = idx.dropDups(); ProgressMeter& progress = cc().curop()->setMessage( "bg index build" , d->nrecords ); unsigned long long n = 0; auto_ptr cc; { auto_ptr c = theDataFileMgr.findAll(ns); cc.reset( new ClientCursor(QueryOption_NoCursorTimeout, c, ns) ); } CursorId id = cc->cursorid; while ( cc->c->ok() ) { BSONObj js = cc->c->current(); try { _indexRecord(d, idxNo, js, cc->c->currLoc(), dupsAllowed); cc->c->advance(); } catch( AssertionException& e ) { if( e.interrupted() ) throw; if ( dropDups ) { DiskLoc toDelete = cc->c->currLoc(); bool ok = cc->c->advance(); cc->updateLocation(); theDataFileMgr.deleteRecord( ns, toDelete.rec(), toDelete, false, true ); if( ClientCursor::find(id, false) == 0 ) { cc.release(); if( !ok ) { /* we were already at the end. normal. */ } else { uasserted(12585, "cursor gone during bg index; dropDups"); } break; } } else { log() << "background addExistingToIndex exception " << e.what() << endl; throw; } } n++; progress.hit(); if ( n % 128 == 0 && !cc->yield() ) { cc.release(); uasserted(12584, "cursor gone during bg index"); break; } } progress.done(); return n; } /* we do set a flag in the namespace for quick checking, but this is our authoritative info - that way on a crash/restart, we don't think we are still building one. */ set bgJobsInProgress; void prep(const char *ns, NamespaceDetails *d) { assertInWriteLock(); bgJobsInProgress.insert(d); d->backgroundIndexBuildInProgress = 1; d->nIndexes--; } void done(const char *ns, NamespaceDetails *d) { d->nIndexes++; d->backgroundIndexBuildInProgress = 0; NamespaceDetailsTransient::get_w(ns).addedIndex(); // clear query optimizer cache assertInWriteLock(); } public: BackgroundIndexBuildJob(const char *ns) : BackgroundOperation(ns) { } unsigned long long go(string ns, NamespaceDetails *d, IndexDetails& idx, int idxNo) { unsigned long long n = 0; prep(ns.c_str(), d); assert( idxNo == d->nIndexes ); try { idx.head = BtreeBucket::addBucket(idx); n = addExistingToIndex(ns.c_str(), d, idx, idxNo); } catch(...) { if( cc().database() && nsdetails(ns.c_str()) == d ) { assert( idxNo == d->nIndexes ); done(ns.c_str(), d); } else { log() << "ERROR: db gone during bg index?" << endl; } throw; } assert( idxNo == d->nIndexes ); done(ns.c_str(), d); return n; } }; // throws DBException static void buildAnIndex(string ns, NamespaceDetails *d, IndexDetails& idx, int idxNo, bool background) { log() << "building new index on " << idx.keyPattern() << " for " << ns << endl; Timer t; unsigned long long n; if( background ) { log(2) << "buildAnIndex: background=true\n"; } assert( !BackgroundOperation::inProgForNs(ns.c_str()) ); // should have been checked earlier, better not be... if( !background ) { n = fastBuildIndex(ns.c_str(), d, idx, idxNo); assert( !idx.head.isNull() ); } else { BackgroundIndexBuildJob j(ns.c_str()); n = j.go(ns, d, idx, idxNo); } log() << "done for " << n << " records " << t.millis() / 1000.0 << "secs" << endl; } /* add keys to indexes for a new record */ static void indexRecord(NamespaceDetails *d, BSONObj obj, DiskLoc loc) { int n = d->nIndexesBeingBuilt(); for ( int i = 0; i < n; i++ ) { try { bool unique = d->idx(i).unique(); _indexRecord(d, i, obj, loc, /*dupsAllowed*/!unique); } catch( DBException& ) { /* try to roll back previously added index entries note <= i (not < i) is important here as the index we were just attempted may be multikey and require some cleanup. */ for( int j = 0; j <= i; j++ ) { try { _unindexRecord(d->idx(j), obj, loc, false); } catch(...) { log(3) << "unindex fails on rollback after unique failure\n"; } } throw; } } } extern BSONObj id_obj; // { _id : 1 } void ensureHaveIdIndex(const char *ns) { NamespaceDetails *d = nsdetails(ns); if ( d == 0 || (d->flags & NamespaceDetails::Flag_HaveIdIndex) ) return; d->flags |= NamespaceDetails::Flag_HaveIdIndex; { NamespaceDetails::IndexIterator i = d->ii(); while( i.more() ) { if( i.next().isIdIndex() ) return; } } string system_indexes = cc().database()->name + ".system.indexes"; BSONObjBuilder b; b.append("name", "_id_"); b.append("ns", ns); b.append("key", id_obj); BSONObj o = b.done(); /* edge case: note the insert could fail if we have hit maxindexes already */ theDataFileMgr.insert(system_indexes.c_str(), o.objdata(), o.objsize(), true); } #pragma pack(1) struct IDToInsert_ { char type; char _id[4]; OID oid; IDToInsert_() { type = (char) jstOID; strcpy(_id, "_id"); assert( sizeof(IDToInsert_) == 17 ); } } idToInsert_; struct IDToInsert : public BSONElement { IDToInsert() : BSONElement( ( char * )( &idToInsert_ ) ) {} } idToInsert; #pragma pack() void DataFileMgr::insertAndLog( const char *ns, const BSONObj &o, bool god ) { BSONObj tmp = o; insert( ns, tmp, god ); logOp( "i", ns, tmp ); } DiskLoc DataFileMgr::insert(const char *ns, BSONObj &o, bool god) { DiskLoc loc = insert( ns, o.objdata(), o.objsize(), god ); if ( !loc.isNull() ) o = BSONObj( loc.rec() ); return loc; } bool prepareToBuildIndex(const BSONObj& io, bool god, string& sourceNS, NamespaceDetails *&sourceCollection); // We are now doing two btree scans for all unique indexes (one here, and one when we've // written the record to the collection. This could be made more efficient inserting // dummy data here, keeping pointers to the btree nodes holding the dummy data and then // updating the dummy data with the DiskLoc of the real record. void checkNoIndexConflicts( NamespaceDetails *d, const BSONObj &obj ) { for ( int idxNo = 0; idxNo < d->nIndexes; idxNo++ ) { if( d->idx(idxNo).unique() ) { IndexDetails& idx = d->idx(idxNo); BSONObjSetDefaultOrder keys; idx.getKeysFromObject(obj, keys); BSONObj order = idx.keyPattern(); for ( BSONObjSetDefaultOrder::iterator i=keys.begin(); i != keys.end(); i++ ) { uassert( 12582, "duplicate key insert for unique index of capped collection", idx.head.btree()->findSingle(idx, idx.head, *i ).isNull() ); } } } } /* note: if god==true, you may pass in obuf of NULL and then populate the returned DiskLoc after the call -- that will prevent a double buffer copy in some cases (btree.cpp). */ DiskLoc DataFileMgr::insert(const char *ns, const void *obuf, int len, bool god, const BSONElement &writeId, bool mayAddIndex) { bool wouldAddIndex = false; massert( 10093 , "cannot insert into reserved $ collection", god || strchr(ns, '$') == 0 ); uassert( 10094 , "invalid ns", strchr( ns , '.' ) > 0 ); const char *sys = strstr(ns, "system."); if ( sys ) { uassert( 10095 , "attempt to insert in reserved database name 'system'", sys != ns); if ( strstr(ns, ".system.") ) { // later:check for dba-type permissions here if have that at some point separate if ( strstr(ns, ".system.indexes" ) ) wouldAddIndex = true; else if ( legalClientSystemNS( ns , true ) ) ; else if ( !god ) { out() << "ERROR: attempt to insert in system namespace " << ns << endl; return DiskLoc(); } } else sys = 0; } bool addIndex = wouldAddIndex && mayAddIndex; NamespaceDetails *d = nsdetails(ns); if ( d == 0 ) { addNewNamespaceToCatalog(ns); /* todo: shouldn't be in the namespace catalog until after the allocations here work. also if this is an addIndex, those checks should happen before this! */ // This may create first file in the database. cc().database()->allocExtent(ns, initialExtentSize(len), false); d = nsdetails(ns); if ( !god ) ensureIdIndexForNewNs(ns); } d->paddingFits(); NamespaceDetails *tableToIndex = 0; string tabletoidxns; if ( addIndex ) { BSONObj io((const char *) obuf); if( !prepareToBuildIndex(io, god, tabletoidxns, tableToIndex) ) return DiskLoc(); } const BSONElement *newId = &writeId; int addID = 0; if( !god ) { /* Check if we have an _id field. If we don't, we'll add it. Note that btree buckets which we insert aren't BSONObj's, but in that case god==true. */ BSONObj io((const char *) obuf); BSONElement idField = io.getField( "_id" ); uassert( 10099 , "_id cannot be an array", idField.type() != Array ); if( idField.eoo() && !wouldAddIndex && strstr(ns, ".local.") == 0 ) { addID = len; if ( writeId.eoo() ) { // Very likely we'll add this elt, so little harm in init'ing here. idToInsert_.oid.init(); newId = &idToInsert; } len += newId->size(); } BSONElementManipulator::lookForTimestamps( io ); } DiskLoc extentLoc; int lenWHdr = len + Record::HeaderSize; lenWHdr = (int) (lenWHdr * d->paddingFactor); if ( lenWHdr == 0 ) { // old datafiles, backward compatible here. assert( d->paddingFactor == 0 ); d->paddingFactor = 1.0; lenWHdr = len + Record::HeaderSize; } // If the collection is capped, check if the new object will violate a unique index // constraint before allocating space. if ( d->nIndexes && d->capped && !god ) { checkNoIndexConflicts( d, BSONObj( reinterpret_cast( obuf ) ) ); } DiskLoc loc = d->alloc(ns, lenWHdr, extentLoc); if ( loc.isNull() ) { // out of space if ( d->capped == 0 ) { // size capped doesn't grow log(1) << "allocating new extent for " << ns << " padding:" << d->paddingFactor << " lenWHdr: " << lenWHdr << endl; cc().database()->allocExtent(ns, followupExtentSize(lenWHdr, d->lastExtentSize), false); loc = d->alloc(ns, lenWHdr, extentLoc); if ( loc.isNull() ){ log() << "WARNING: alloc() failed after allocating new extent. lenWHdr: " << lenWHdr << " last extent size:" << d->lastExtentSize << "; trying again\n"; for ( int zzz=0; zzz<10 && lenWHdr > d->lastExtentSize; zzz++ ){ log() << "try #" << zzz << endl; cc().database()->allocExtent(ns, followupExtentSize(len, d->lastExtentSize), false); loc = d->alloc(ns, lenWHdr, extentLoc); if ( ! loc.isNull() ) break; } } } if ( loc.isNull() ) { log() << "out of space in datafile " << ns << " capped:" << d->capped << endl; assert(d->capped); return DiskLoc(); } } Record *r = loc.rec(); assert( r->lengthWithHeaders >= lenWHdr ); if( addID ) { /* a little effort was made here to avoid a double copy when we add an ID */ ((int&)*r->data) = *((int*) obuf) + newId->size(); memcpy(r->data+4, newId->rawdata(), newId->size()); memcpy(r->data+4+newId->size(), ((char *)obuf)+4, addID-4); } else { if( obuf ) memcpy(r->data, obuf, len); } Extent *e = r->myExtent(loc); if ( e->lastRecord.isNull() ) { e->firstRecord = e->lastRecord = loc; r->prevOfs = r->nextOfs = DiskLoc::NullOfs; } else { Record *oldlast = e->lastRecord.rec(); r->prevOfs = e->lastRecord.getOfs(); r->nextOfs = DiskLoc::NullOfs; oldlast->nextOfs = loc.getOfs(); e->lastRecord = loc; } d->nrecords++; d->datasize += r->netLength(); // we don't bother clearing those stats for the god tables - also god is true when adidng a btree bucket if ( !god ) NamespaceDetailsTransient::get_w( ns ).notifyOfWriteOp(); if ( tableToIndex ) { BSONObj info = loc.obj(); bool background = info["background"].trueValue(); int idxNo = tableToIndex->nIndexes; IndexDetails& idx = tableToIndex->addIndex(tabletoidxns.c_str(), !background); // clear transient info caches so they refresh; increments nIndexes idx.info = loc; try { buildAnIndex(tabletoidxns, tableToIndex, idx, idxNo, background); } catch( DBException& ) { // save our error msg string as an exception or dropIndexes will overwrite our message LastError *le = lastError.get(); int savecode = 0; string saveerrmsg; if ( le ) { savecode = le->code; saveerrmsg = le->msg; } // roll back this index string name = idx.indexName(); BSONObjBuilder b; string errmsg; bool ok = dropIndexes(tableToIndex, tabletoidxns.c_str(), name.c_str(), errmsg, b, true); if( !ok ) { log() << "failed to drop index after a unique key error building it: " << errmsg << ' ' << tabletoidxns << ' ' << name << endl; } assert( le && !saveerrmsg.empty() ); raiseError(savecode,saveerrmsg.c_str()); throw; } } /* add this record to our indexes */ if ( d->nIndexes ) { try { BSONObj obj(r->data); indexRecord(d, obj, loc); } catch( AssertionException& e ) { // should be a dup key error on _id index if( tableToIndex || d->capped ) { massert( 12583, "unexpected index insertion failure on capped collection", !d->capped ); string s = e.toString(); s += " : on addIndex/capped - collection and its index will not match"; uassert_nothrow(s.c_str()); log() << s << '\n'; } else { // normal case -- we can roll back _deleteRecord(d, ns, r, loc); throw; } } } // out() << " inserted at loc:" << hex << loc.getOfs() << " lenwhdr:" << hex << lenWHdr << dec << ' ' << ns << endl; return loc; } /* special version of insert for transaction logging -- streamlined a bit. assumes ns is capped and no indexes */ Record* DataFileMgr::fast_oplog_insert(NamespaceDetails *d, const char *ns, int len) { RARELY assert( d == nsdetails(ns) ); DiskLoc extentLoc; int lenWHdr = len + Record::HeaderSize; DiskLoc loc = d->alloc(ns, lenWHdr, extentLoc); if ( loc.isNull() ) { assert(false); return 0; } Record *r = loc.rec(); assert( r->lengthWithHeaders >= lenWHdr ); Extent *e = r->myExtent(loc); if ( e->lastRecord.isNull() ) { e->firstRecord = e->lastRecord = loc; r->prevOfs = r->nextOfs = DiskLoc::NullOfs; } else { Record *oldlast = e->lastRecord.rec(); r->prevOfs = e->lastRecord.getOfs(); r->nextOfs = DiskLoc::NullOfs; oldlast->nextOfs = loc.getOfs(); e->lastRecord = loc; } d->nrecords++; return r; } } // namespace mongo #include "clientcursor.h" namespace mongo { void dropDatabase(const char *ns) { // ns is of the form ".$cmd" char db[256]; nsToDatabase(ns, db); log(1) << "dropDatabase " << db << endl; assert( cc().database()->name == db ); BackgroundOperation::assertNoBgOpInProgForDb(db); closeDatabase( db ); _deleteDataFiles(db); } typedef boost::filesystem::path Path; // back up original database files to 'temp' dir void _renameForBackup( const char *database, const Path &reservedPath ) { Path newPath( reservedPath ); if ( directoryperdb ) newPath /= database; class Renamer : public FileOp { public: Renamer( const Path &newPath ) : newPath_( newPath ) {} private: const boost::filesystem::path &newPath_; virtual bool apply( const Path &p ) { if ( !boost::filesystem::exists( p ) ) return false; boost::filesystem::rename( p, newPath_ / ( p.leaf() + ".bak" ) ); return true; } virtual const char * op() const { return "renaming"; } } renamer( newPath ); _applyOpToDataFiles( database, renamer, true ); } // move temp files to standard data dir void _replaceWithRecovered( const char *database, const char *reservedPathString ) { Path newPath( dbpath ); if ( directoryperdb ) newPath /= database; class Replacer : public FileOp { public: Replacer( const Path &newPath ) : newPath_( newPath ) {} private: const boost::filesystem::path &newPath_; virtual bool apply( const Path &p ) { if ( !boost::filesystem::exists( p ) ) return false; boost::filesystem::rename( p, newPath_ / p.leaf() ); return true; } virtual const char * op() const { return "renaming"; } } replacer( newPath ); _applyOpToDataFiles( database, replacer, true, reservedPathString ); } // generate a directory name for storing temp data files Path uniqueReservedPath( const char *prefix ) { Path repairPath = Path( repairpath ); Path reservedPath; int i = 0; bool exists = false; do { stringstream ss; ss << prefix << "_repairDatabase_" << i++; reservedPath = repairPath / ss.str(); BOOST_CHECK_EXCEPTION( exists = boost::filesystem::exists( reservedPath ) ); } while ( exists ); return reservedPath; } boost::intmax_t dbSize( const char *database ) { class SizeAccumulator : public FileOp { public: SizeAccumulator() : totalSize_( 0 ) {} boost::intmax_t size() const { return totalSize_; } private: virtual bool apply( const boost::filesystem::path &p ) { if ( !boost::filesystem::exists( p ) ) return false; totalSize_ += boost::filesystem::file_size( p ); return true; } virtual const char *op() const { return "checking size"; } boost::intmax_t totalSize_; }; SizeAccumulator sa; _applyOpToDataFiles( database, sa ); return sa.size(); } #if !defined(_WIN32) } // namespace mongo #include namespace mongo { #endif boost::intmax_t freeSpace() { #if !defined(_WIN32) struct statvfs info; assert( !statvfs( dbpath.c_str() , &info ) ); return boost::intmax_t( info.f_bavail ) * info.f_frsize; #else return -1; #endif } bool repairDatabase( const char *ns, string &errmsg, bool preserveClonedFilesOnFailure, bool backupOriginalFiles ) { stringstream ss; ss << "localhost:" << cmdLine.port; string localhost = ss.str(); // ns is of the form ".$cmd" char dbName[256]; nsToDatabase(ns, dbName); problem() << "repairDatabase " << dbName << endl; assert( cc().database()->name == dbName ); BackgroundOperation::assertNoBgOpInProgForDb(dbName); boost::intmax_t totalSize = dbSize( dbName ); boost::intmax_t freeSize = freeSpace(); if ( freeSize > -1 && freeSize < totalSize ) { stringstream ss; ss << "Cannot repair database " << dbName << " having size: " << totalSize << " (bytes) because free disk space is: " << freeSize << " (bytes)"; errmsg = ss.str(); problem() << errmsg << endl; return false; } Path reservedPath = uniqueReservedPath( ( preserveClonedFilesOnFailure || backupOriginalFiles ) ? "backup" : "$tmp" ); BOOST_CHECK_EXCEPTION( boost::filesystem::create_directory( reservedPath ) ); string reservedPathString = reservedPath.native_directory_string(); bool res; { // clone to temp location, which effectively does repair Client::Context ctx( dbName, reservedPathString ); assert( ctx.justCreated() ); res = cloneFrom(localhost.c_str(), errmsg, dbName, /*logForReplication=*/false, /*slaveok*/false, /*replauth*/false, /*snapshot*/false); closeDatabase( dbName, reservedPathString.c_str() ); } if ( !res ) { problem() << "clone failed for " << dbName << " with error: " << errmsg << endl; if ( !preserveClonedFilesOnFailure ) BOOST_CHECK_EXCEPTION( boost::filesystem::remove_all( reservedPath ) ); return false; } Client::Context ctx( dbName ); closeDatabase( dbName ); if ( backupOriginalFiles ) { _renameForBackup( dbName, reservedPath ); } else { _deleteDataFiles( dbName ); BOOST_CHECK_EXCEPTION( boost::filesystem::create_directory( Path( dbpath ) / dbName ) ); } _replaceWithRecovered( dbName, reservedPathString.c_str() ); if ( !backupOriginalFiles ) BOOST_CHECK_EXCEPTION( boost::filesystem::remove_all( reservedPath ) ); return true; } void _applyOpToDataFiles( const char *database, FileOp &fo, bool afterAllocator, const string& path ) { if ( afterAllocator ) theFileAllocator().waitUntilFinished(); string c = database; c += '.'; boost::filesystem::path p(path); if ( directoryperdb ) p /= database; boost::filesystem::path q; q = p / (c+"ns"); bool ok = false; BOOST_CHECK_EXCEPTION( ok = fo.apply( q ) ); if ( ok ) log(2) << fo.op() << " file " << q.string() << '\n'; int i = 0; int extra = 10; // should not be necessary, this is defensive in case there are missing files while ( 1 ) { assert( i <= DiskLoc::MaxFiles ); stringstream ss; ss << c << i; q = p / ss.str(); BOOST_CHECK_EXCEPTION( ok = fo.apply(q) ); if ( ok ) { if ( extra != 10 ){ log(1) << fo.op() << " file " << q.string() << '\n'; log() << " _applyOpToDataFiles() warning: extra == " << extra << endl; } } else if ( --extra <= 0 ) break; i++; } } NamespaceDetails* nsdetails_notinline(const char *ns) { return nsdetails(ns); } bool DatabaseHolder::closeAll( const string& path , BSONObjBuilder& result , bool force ){ log() << "DatabaseHolder::closeAll path:" << path << endl; dbMutex.assertWriteLocked(); map& m = _paths[path]; _size -= m.size(); set< string > dbs; for ( map::iterator i = m.begin(); i != m.end(); i++ ) { dbs.insert( i->first ); } BSONObjBuilder bb( result.subarrayStart( "dbs" ) ); int n = 0; int nNotClosed = 0; for( set< string >::iterator i = dbs.begin(); i != dbs.end(); ++i ) { string name = *i; log(2) << "DatabaseHolder::closeAll path:" << path << " name:" << name << endl; Client::Context ctx( name , path ); if( !force && BackgroundOperation::inProgForDb(name.c_str()) ) { log() << "WARNING: can't close database " << name << " because a bg job is in progress - try killOp command" << endl; nNotClosed++; } else { closeDatabase( name.c_str() , path ); bb.append( bb.numStr( n++ ).c_str() , name ); } } bb.done(); if( nNotClosed ) result.append("nNotClosed", nNotClosed); return true; } } // namespace mongo