From 13f208e8c4efcce662da423088241a4663a5f6f1 Mon Sep 17 00:00:00 2001 From: Alex Neben Date: Tue, 5 Sep 2023 14:32:12 +0000 Subject: [PATCH] SERVER-76751 Pinning all python deps with poetry --- SConstruct | 39 - .../base_images/workload/Dockerfile | 2 +- .../evergreen_gen_build_metrics_tasks.py | 1 + buildscripts/libdeps/README.md | 2 +- buildscripts/linter/runner.py | 2 +- buildscripts/requirements.txt | 3 - .../resmokelib/powercycle/setup/__init__.py | 5 +- buildscripts/scons.py | 2 +- buildscripts/setup_spawnhost_coredump | 10 +- buildscripts/validate_env.py | 175 - docs/build_system.md | 2 +- docs/build_system_reference.md | 2 +- docs/building.md | 15 +- etc/evergreen.yml | 1 - etc/evergreen_yml_components/definitions.yml | 45 +- etc/pip/README.md | 51 - etc/pip/compile-requirements.txt | 6 - etc/pip/components/aws.req | 2 - etc/pip/components/build_metrics.req | 5 - etc/pip/components/compile.req | 6 - etc/pip/components/core.req | 7 - etc/pip/components/evergreen.req | 6 - etc/pip/components/external_auth.req | 10 - etc/pip/components/idl.req | 2 - etc/pip/components/jiraclient.req | 5 - etc/pip/components/libdeps.req | 9 - etc/pip/components/lint.req | 13 - etc/pip/components/platform.req | 9 - etc/pip/components/testing.req | 34 - etc/pip/components/tooling_metrics.req | 1 - etc/pip/core-requirements.txt | 2 - etc/pip/dev-requirements.txt | 12 - etc/pip/evgtest-requirements.txt | 7 - etc/pip/external-auth-requirements.txt | 1 - etc/pip/jira-requirements.txt | 4 - etc/pip/libdeps-requirements.txt | 1 - etc/pip/lint-requirements.txt | 4 - etc/pip/powercycle-requirements.txt | 7 - etc/pip/toolchain-requirements.txt | 21 - etc/system_perf.yml | 7 +- evergreen/compile_venv_dependency_check.sh | 12 - evergreen/external_auth_aws_pip.sh | 19 - evergreen/external_auth_pip.sh | 19 - evergreen/functions/venv_setup.sh | 49 +- evergreen/libdeps_setup.sh | 18 +- evergreen/prelude_venv.sh | 3 +- poetry.lock | 4214 +++++++++++++++++ pyproject.toml | 171 + site_scons/mongo/pip_requirements.py | 60 +- .../site_tools/mongo_pretty_printer_tests.py | 2 +- 50 files changed, 4515 insertions(+), 590 deletions(-) delete mode 100644 buildscripts/requirements.txt delete mode 100755 buildscripts/validate_env.py delete mode 100644 etc/pip/README.md delete mode 100644 etc/pip/compile-requirements.txt delete mode 100644 etc/pip/components/aws.req delete mode 100644 etc/pip/components/build_metrics.req delete mode 100644 etc/pip/components/compile.req delete mode 100644 etc/pip/components/core.req delete mode 100644 etc/pip/components/evergreen.req delete mode 100644 etc/pip/components/external_auth.req delete mode 100644 etc/pip/components/idl.req delete mode 100644 etc/pip/components/jiraclient.req delete mode 100644 etc/pip/components/libdeps.req delete mode 100644 etc/pip/components/lint.req delete mode 100644 etc/pip/components/platform.req delete mode 100644 etc/pip/components/testing.req delete mode 100644 etc/pip/components/tooling_metrics.req delete mode 100644 etc/pip/core-requirements.txt delete mode 100644 etc/pip/dev-requirements.txt delete mode 100644 etc/pip/evgtest-requirements.txt delete mode 100644 etc/pip/external-auth-requirements.txt delete mode 100644 etc/pip/jira-requirements.txt delete mode 100644 etc/pip/libdeps-requirements.txt delete mode 100644 etc/pip/lint-requirements.txt delete mode 100644 etc/pip/powercycle-requirements.txt delete mode 100644 etc/pip/toolchain-requirements.txt delete mode 100644 evergreen/compile_venv_dependency_check.sh delete mode 100755 evergreen/external_auth_aws_pip.sh delete mode 100755 evergreen/external_auth_pip.sh create mode 100644 poetry.lock create mode 100644 pyproject.toml diff --git a/SConstruct b/SConstruct index 06f362e0230..bc6803d134c 100644 --- a/SConstruct +++ b/SConstruct @@ -1515,13 +1515,6 @@ env_vars.Add( default='auto', ) -env_vars.Add( - PathVariable( - 'VALIDATE_ENV_SCRIPT', - help='''Path of a python script to validate the mongo workspace for common issues. - An example script is located at buildscripts/validate_env.py - ''', default=None, validator=PathVariable.PathIsFile)) - env_vars.Add( 'WINDOWS_OPENSSL_BIN', help='Sets the path to the openssl binaries for packaging', @@ -1771,41 +1764,9 @@ else: env.FatalError(f"Error setting VERBOSE variable: {e}") env.AddMethod(lambda env: env['VERBOSE'], 'Verbose') - -def CheckDevEnv(context): - context.Message('Checking if dev env is valid... ') - context.sconf.cached = 0 - if env.get('VALIDATE_ENV_SCRIPT'): - proc = subprocess.run( - [sys.executable, env.File('$VALIDATE_ENV_SCRIPT').get_path()], capture_output=True, - text=True) - context.Log(proc.stdout) - context.Log(proc.stderr) - context.sconf.lastTarget = Value(proc.stdout + proc.stderr) - result = proc.returncode == 0 - context.Result(result) - if env.Verbose(): - print(proc.stdout) - else: - context.Result("skipped") - result = True - return result - - env.Append( LINKFLAGS=['${_concat(COMPILER_EXEC_PREFIX_OPT, LINKFLAGS_COMPILER_EXEC_PREFIX, "", __env__)}']) -devenv_check = Configure( - env, - help=False, - custom_tests={ - 'CheckDevEnv': CheckDevEnv, - }, -) -if not devenv_check.CheckDevEnv(): - env.ConfError(f"Failed to validate dev env:\n{devenv_check.lastTarget.get_contents().decode()}") -devenv_check.Finish() - # Normalize the ICECC_DEBUG option try: env['ICECC_DEBUG'] = to_boolean(env['ICECC_DEBUG']) diff --git a/buildscripts/antithesis/base_images/workload/Dockerfile b/buildscripts/antithesis/base_images/workload/Dockerfile index 19b890d06af..c66300905a9 100644 --- a/buildscripts/antithesis/base_images/workload/Dockerfile +++ b/buildscripts/antithesis/base_images/workload/Dockerfile @@ -28,7 +28,7 @@ RUN python -m pip install --upgrade pip wheel # copy resmoke, make the venv, and pip install COPY src /resmoke -RUN bash -c "cd /resmoke && python -m venv python3-venv && . python3-venv/bin/activate && pip install --upgrade pip wheel && pip install -r ./buildscripts/requirements.txt" +RUN bash -c "cd /resmoke && python3 -m venv python3-venv && . python3-venv/bin/activate && python3 -m pip install 'poetry==1.5.1' && python3 -m poetry install --no-root --sync" # copy the mongo binary -- make sure it is executable COPY mongo /usr/bin diff --git a/buildscripts/evergreen_gen_build_metrics_tasks.py b/buildscripts/evergreen_gen_build_metrics_tasks.py index 0358b647030..dc7f9c563f5 100755 --- a/buildscripts/evergreen_gen_build_metrics_tasks.py +++ b/buildscripts/evergreen_gen_build_metrics_tasks.py @@ -133,6 +133,7 @@ def main(): FunctionCall("kill processes"), FunctionCall("cleanup environment"), FunctionCall("set up venv"), + FunctionCall("set up libdeps venv"), FunctionCall("upload pip requirements"), FunctionCall("f_expansions_write"), FunctionCall("configure evergreen api credentials"), diff --git a/buildscripts/libdeps/README.md b/buildscripts/libdeps/README.md index 0b5080c8e51..b84cee5f407 100644 --- a/buildscripts/libdeps/README.md +++ b/buildscripts/libdeps/README.md @@ -51,7 +51,7 @@ Which will give an output similar to this: The graph visualizer tools starts up a web service to provide a frontend GUI to navigating and examining the graph files. The Visualizer used a Python Flask backend and React Javascript frontend. You will need to install the libdeps requirements file to python to run the backend: - python3 -m pip install -r etc/pip/libdeps-requirements.txt + python3 -m poetry install --no-root --sync -E libdeps For installing the dependencies for the frontend, you will need node >= 12.0.0 and npm installed and in the PATH. To install the dependencies navigate to directory where package.json lives, and run: diff --git a/buildscripts/linter/runner.py b/buildscripts/linter/runner.py index 1d5848b32fb..3766a48d4e0 100644 --- a/buildscripts/linter/runner.py +++ b/buildscripts/linter/runner.py @@ -138,7 +138,7 @@ Could not find the correct version of linter '%s', expected '%s'. Check your PATH environment variable or re-run with --verbose for more information. To fix, install the needed python modules for Python 3.x: - python3 -m pip install -r etc/pip/lint-requirements.txt + python3 -m poetry install --no-root --sync These commands are typically available via packages with names like python-pip, or python3-pip. See your OS documentation for help. diff --git a/buildscripts/requirements.txt b/buildscripts/requirements.txt deleted file mode 100644 index 8986eaa311a..00000000000 --- a/buildscripts/requirements.txt +++ /dev/null @@ -1,3 +0,0 @@ -# This file is for the convenience of users who previously relied on buildscripts/requirements.txt. -# For future use, please use etc/pip/dev-requirements.txt instead. --r ../etc/pip/dev-requirements.txt diff --git a/buildscripts/resmokelib/powercycle/setup/__init__.py b/buildscripts/resmokelib/powercycle/setup/__init__.py index 07c43d76d94..383dd05f627 100644 --- a/buildscripts/resmokelib/powercycle/setup/__init__.py +++ b/buildscripts/resmokelib/powercycle/setup/__init__.py @@ -38,7 +38,7 @@ class SetUpEC2Instance(PowercycleCommand): # Second operation - # Copy buildscripts and mongoDB executables to the remote host. - files = ["etc", "buildscripts", "dist-test/bin"] + files = ["etc", "buildscripts", "dist-test/bin", "poetry.lock", "pyproject.toml"] shared_libs = "dist-test/lib" if os.path.isdir(shared_libs): @@ -59,7 +59,8 @@ class SetUpEC2Instance(PowercycleCommand): cmds = f"{cmds}; $python_loc -m venv --system-site-packages {venv}" cmds = f"{cmds}; activate=$(find {venv} -name 'activate')" cmds = f"{cmds}; . $activate" - cmds = f"{cmds}; pip3 install -r $remote_dir/etc/pip/powercycle-requirements.txt" + cmds = f"{cmds}; python3 -m pip install 'poetry==1.5.1'" + cmds = f"{cmds}; pushd $remote_dir && python3 -m poetry install --no-root --sync && popd" self.remote_op.operation(SSHOperation.SHELL, cmds, retry=True, retry_count=retry_count) diff --git a/buildscripts/scons.py b/buildscripts/scons.py index f7f7fcd3d5b..b1ddc85e54d 100755 --- a/buildscripts/scons.py +++ b/buildscripts/scons.py @@ -22,7 +22,7 @@ sys.path = [SCONS_DIR, SITE_TOOLS_DIR] + sys.path from mongo.pip_requirements import verify_requirements, MissingRequirements try: - verify_requirements('etc/pip/compile-requirements.txt') + verify_requirements() except MissingRequirements as ex: print(ex) sys.exit(1) diff --git a/buildscripts/setup_spawnhost_coredump b/buildscripts/setup_spawnhost_coredump index 726284ec56a..ba21063b45a 100755 --- a/buildscripts/setup_spawnhost_coredump +++ b/buildscripts/setup_spawnhost_coredump @@ -180,7 +180,15 @@ fi' >> .bash_profile ln -s ${SRC_DIR}/buildscripts buildscripts # Install pymongo to get the bson library for pretty-printers. - ${TOOLCHAIN_ROOT}/bin/pip3 install -r ${SRC_DIR}/etc/pip/dev-requirements.txt & + # This is copied from evergreen/functions/venv_setup.sh + if [ "Windows_NT" = "$OS" ]; then + ${TOOLCHAIN_ROOT}/bin/python3 -m pip install "poetry==1.5.1" "charset-normalizer==2.0.12" + else + ${TOOLCHAIN_ROOT}/bin/python3 -m pip install "poetry==1.5.1" + fi + pushd ${SRC_DIR} + ${TOOLCHAIN_ROOT}/bin/python3 -m poetry install --no-root --sync & + popd else archive_fail "src" fi diff --git a/buildscripts/validate_env.py b/buildscripts/validate_env.py deleted file mode 100755 index 2d9e6a570b6..00000000000 --- a/buildscripts/validate_env.py +++ /dev/null @@ -1,175 +0,0 @@ -#!/usr/bin/env python3 -import contextlib -import os -import sys -import re -import urllib.request -from pathlib import Path -import git -import yaml - -REQUIREMENTS_PATH = "buildscripts/requirements.txt" -GIT_ORG = "10gen" -ENTERPRISE_PATH = "src/mongo/db/modules/enterprise" -VENV_PATH = "python3-venv/bin/activate" -# alert user if less than 10gb of space left -STORAGE_AMOUNT = 10 -# REQUIREMENTS_PATH = "buildscripts/requirements.txt" -LATEST_RELEASES = "https://raw.githubusercontent.com/mongodb/mongo/master/src/mongo/util/version/releases.yml" - -# determine the path of the mongo directory -# this assumes the location of this script is in the buildscripts directory -buildscripts_path = os.path.dirname(os.path.realpath(__file__)) -mongo_path = os.path.split(buildscripts_path)[0] -sys.path.append(mongo_path) - -# pylint: disable=wrong-import-position -from site_scons.mongo.pip_requirements import verify_requirements, MissingRequirements -from buildscripts.resmokelib.utils import evergreen_conn - - -def check_cwd() -> int: - print("Checking if current directory is mongo root directory...") - if os.getcwd() != mongo_path: - print("ERROR: We do not support building outside of the mongo root directory.") - return 1 - - return 0 - - -# checks if the script is being run inside of a python venv or not -def in_virtualenv() -> bool: - base_prefix = getattr(sys, "base_prefix", None) or getattr(sys, "real_prefix", - None) or sys.prefix - return base_prefix != sys.prefix - - -def get_git_repo(path: str, repo_name: str) -> git.Repo: - try: - return git.Repo(path) - except git.exc.NoSuchPathError: - print(f"ERROR: Count not find {repo_name} git repo at {mongo_path}") - print("Make sure your validate_env.py file is in the buildscripts directory") - return None - - -# returns the hash of the most recent commit that is shared between upstream and HEAD -def get_common_hash(repo: git.Repo, repo_name: str) -> str: - if not repo: - return None - - upstream_remote = None - - # determine which remote is pointed to the 10gen github repo - for remote in repo.remotes: - if remote.url.endswith(f"{GIT_ORG}/{repo_name}.git"): - upstream_remote = remote - break - - if upstream_remote is None: - print("ERROR: Could not find remote for:", f"{GIT_ORG}/{repo_name}") - return None - - upstream_remote.fetch("master") - common_hash = repo.merge_base("HEAD", f"{upstream_remote.name}/master") - - if not common_hash or len(common_hash) == 0: - print(f"ERROR: Could not find common hash for {repo_name}") - return None - - return common_hash[0] - - -def check_git_repos() -> int: - print("Checking if mongo repo and enterprise module repo are in sync...") - mongo_repo = get_git_repo(mongo_path, "mongo") - mongo_hash = get_common_hash(mongo_repo, "mongo") - enterprise_dir = os.path.join(mongo_path, ENTERPRISE_PATH) - enterprise_repo = get_git_repo(enterprise_dir, "mongo-enterprise-modules") - enterprise_hash = get_common_hash(enterprise_repo, "mongo-enterprise-modules") - - if not mongo_hash or not enterprise_hash: - return 1 - - evg_api = evergreen_conn.get_evergreen_api(Path.home() / '.evergreen.yml') - manifest = evg_api.manifest("mongodb-mongo-master", mongo_hash) - modules = manifest.modules - if "enterprise" in modules and str(enterprise_hash) != modules["enterprise"].revision: - synced_enterprise_hash = modules["enterprise"].revision - print("Error: the mongo repo and enterprise module repo are out of sync") - print( - f"Try `git fetch; git rebase --onto {synced_enterprise_hash}` in the enterprise repo directory" - ) - print(f"Your enterprise repo directory is {enterprise_dir}") - return 1 - - # Check if the git tag is out of date - # https://mongodb.stackenterprise.co/questions/145 - print("Checking if your mongo repo git tag is up to date...") - releases_page = urllib.request.urlopen(LATEST_RELEASES) - page_bytes = releases_page.read() - text = page_bytes.decode("utf-8") - parsed_text = yaml.safe_load(text) - compat_versions = parsed_text['featureCompatibilityVersions'] - if not compat_versions or len(compat_versions) <= 1: - print( - "ERROR: Something went wrong, there are not at least two feature compatibility mongo versions" - ) - return 1 - else: - # Hard coded to the second-to-last version because the last version should be the test version - target_version = compat_versions[-2] - local_version = mongo_repo.git.describe() - # get the version info we want out of git describe - trimmed_local_version = re.search("([0-9]+\\.[0-9]+)(\\.[0-9])?", local_version).group(1) - if trimmed_local_version != target_version: - print( - "ERROR: Your git tag is out of date, run `git config remote.origin.tagOpt '--tags'; git fetch origin master`" - ) - return 1 - - return 0 - - -# check for missing dependencies -def check_dependencies() -> int: - print("Checking for missing dependencies...") - requirements_file_path = os.path.join(mongo_path, REQUIREMENTS_PATH) - try: - with contextlib.redirect_stdout(None): - verify_requirements(requirements_file_path) - except MissingRequirements as ex: - print(ex) - print( - f"ERROR: Found missing dependencies, run `python -m pip install -r {REQUIREMENTS_PATH}`" - ) - if not in_virtualenv(): - print( - "WARNING: you are not in a python venv, we recommend using one to handle your requirements." - ) - return 1 - - return 0 - - -def check_space() -> int: - print("Checking if there is enough disk space to build...") - # Get the filesystem information where the mongo directory lies - statvfs = os.statvfs(mongo_path) - free_bytes = statvfs.f_frsize * statvfs.f_bfree - free_gb = (free_bytes // 1000) / 1000 - - # Warn if there is a low amount of space left in the filesystem - if free_gb < STORAGE_AMOUNT: - print(f"WARNING: only {free_gb}GB of space left in filesystem") - - -def main() -> int: - if any([check_cwd(), check_git_repos(), check_dependencies(), check_space()]): - exit(1) - - -if __name__ == '__main__': - main() - -# More requirements can be added as new issues appear diff --git a/docs/build_system.md b/docs/build_system.md index bba2a24ddde..6372016ed78 100644 --- a/docs/build_system.md +++ b/docs/build_system.md @@ -229,7 +229,7 @@ To use the post-build tools, you must first build the libdeps dependency graph b You must also install the requirements file: ``` -python3 -m pip install -r etc/pip/libdeps-requirements.txt +python3 -m poetry install --no-root --sync -E libdeps ``` After the graph file is created, it can be used as input into the `gacli` tool to perform linting and analysis on the complete dependency graph. The `gacli` tool has options for what types of analysis to perform. A complete list can be found using the `--help` option. Minimally, you can run the `gacli` tool by just passing the graph file you wish to analyze: diff --git a/docs/build_system_reference.md b/docs/build_system_reference.md index 2bba3adcb4c..5505337ad0a 100644 --- a/docs/build_system_reference.md +++ b/docs/build_system_reference.md @@ -294,7 +294,7 @@ The libdeps linter also has the `--libdeps-linting=print` option which will perf The dependency graph can be analyzed post-build by leveraging the completeness of the graph to perform more extensive analysis. You will need to install the libdeps requirements file to python when attempting to use the post-build analysis tools: ``` -python3 -m pip install -r etc/pip/libdeps-requirements.txt +python3 -m poetry install --no-root --sync -E libdeps ``` The command line interface tool (gacli) has a comprehensive help text which will describe the available analysis options and interface. The visualizer tool includes a GUI which displays the available analysis options graphically. These tools will be briefly covered in the following sections. diff --git a/docs/building.md b/docs/building.md index d19443998a3..da62f7f70f6 100644 --- a/docs/building.md +++ b/docs/building.md @@ -48,12 +48,16 @@ modules must be installed. Python 3 is included in macOS 10.15 and later. For earlier macOS versions, Python 3 can be installed using Homebrew or MacPorts or similar. -To install the required Python modules, run: - - $ python3 -m pip install -r etc/pip/compile-requirements.txt +MongoDB manages our python dependencies with poetry. +You can see other install instructions for poetry by reading this [install guide](https://python-poetry.org/). Installing the requirements inside a python3 based virtualenv -dedicated to building MongoDB is recommended. +dedicated to building MongoDB is optional but recommended. + + $ python3 -m venv --prompt mongo # Optional (venv_path can be a path of your choice) + $ source /bin/activate # Optional (might be slightly different based on the your shell) + $ python3 -m pip install poetry + $ python3 -m poetry install --no-root --sync Note: In order to compile C-based Python modules, you'll also need the Python and OpenSSL C headers. Run: @@ -62,6 +66,9 @@ Python and OpenSSL C headers. Run: * Ubuntu (20.04 and newer)/Debian (Bullseye and newer) - `apt install python-dev-is-python3 libssl-dev` * Ubuntu (18.04 and older)/Debian (Buster and older) - `apt install python3.7-dev libssl-dev` +Note: If you are seeing errors involving "Prompt dismissed.." you might need to run the following command before poetry install. + + $ export PYTHON_KEYRING_BACKEND=keyring.backends.null.Keyring SCons --------------- diff --git a/etc/evergreen.yml b/etc/evergreen.yml index 2ca217c1cc6..ed693c5fd07 100644 --- a/etc/evergreen.yml +++ b/etc/evergreen.yml @@ -2836,7 +2836,6 @@ buildvariants: - name: validate_commit_message - name: lint_large_files_check - name: check_feature_flag_tags - - name: compile_venv_deps_check - name: resmoke_validation_tests - name: version_gen_validation distros: diff --git a/etc/evergreen_yml_components/definitions.yml b/etc/evergreen_yml_components/definitions.yml index f8abc6bdf3f..995593abed3 100644 --- a/etc/evergreen_yml_components/definitions.yml +++ b/etc/evergreen_yml_components/definitions.yml @@ -839,8 +839,16 @@ functions: binary: bash args: - "src/evergreen/functions/venv_setup.sh" - env: - pip_dir: ${pip_dir} + + # This needs to be run after "set up venv" + # This depends on having a venv already setup + # This just installs the extra deps needed for libdeps + "set up libdeps venv": &set_up_libdeps_venv + command: subprocess.exec + params: + binary: bash + args: + - "src/evergreen/libdeps_setup.sh" "upload pip requirements": &upload_pip_requirements command: s3.put @@ -2699,21 +2707,6 @@ tasks: content_type: application/tar display_name: Benchmarks -- name: compile_venv_deps_check - commands: - - *f_expansions_write - - command: manifest.load - - func: "git get project and add git tag" - - *f_expansions_write - - *kill_processes - - *cleanup_environment - - command: subprocess.exec - type: test - params: - binary: bash - args: - - "src/evergreen/compile_venv_dependency_check.sh" - - name: determine_patch_tests commands: - *f_expansions_write @@ -2776,7 +2769,6 @@ tasks: - "./etc/evergreen_nightly.yml" - "./etc/evergreen.yml" - "./etc/evergreen_yml_components/**" - - "./etc/pip/**" - "./etc/repo_config.yaml" - "./etc/scons/**" - "buildscripts/**" @@ -2794,6 +2786,8 @@ tasks: - "src/third_party/JSON-Schema-Test-Suite/tests/draft4/**" - "src/third_party/mock_ocsp_responder/**" - "src/third_party/schemastore.org/**" + - "poetry.lock" + - "pyproject.toml" exclude_files: - "*_test.pdb" @@ -5502,11 +5496,6 @@ tasks: - *f_expansions_write - func: "do setup" - func: "f_expansions_write" - - command: subprocess.exec - params: - binary: bash - args: - - "src/evergreen/external_auth_pip.sh" - func: "run tests" vars: resmoke_jobs_max: ${external_auth_jobs_max|4} @@ -5525,11 +5514,6 @@ tasks: silent: true args: - "src/evergreen/external_auth_aws_setup.sh" - - command: subprocess.exec - params: - binary: bash - args: - - "src/evergreen/external_auth_aws_pip.sh" - func: "run tests" - <<: *task_template @@ -5539,11 +5523,6 @@ tasks: - *f_expansions_write - func: "do setup" - func: "f_expansions_write" - - command: subprocess.exec - params: - binary: bash - args: - - "src/evergreen/external_auth_pip.sh" - command: subprocess.exec params: binary: bash diff --git a/etc/pip/README.md b/etc/pip/README.md deleted file mode 100644 index 0ea733c1062..00000000000 --- a/etc/pip/README.md +++ /dev/null @@ -1,51 +0,0 @@ -## On requirements (`*-requirements.txt`) files - -MongoDB requires multiple pypa projects installed to build and test. To that end, we provide our own -`*-requirements.txt` files for specific domains of use. Inside each requirements file, there are -only include statements for component files. These files are the bare requirements for specific -components of our python environment. This separation allows us to avoid repetition and conflict in -our requirements across components. - -For most developers, if you pip-install `dev-requirements.txt`, you have the python requirements to -lint, build, and test MongoDB. - -## How to modify a pypa project requirement in a component - -The most common edit of our requirements is likely a change to the constraints on a pypa project -that we already use. For example, say that we currently require `pymongo >= 3.0, < 3.6.0` in the -component `core`. You would like to use PyMongo 3.7, so you instead modify the line in -`etc/pip/components/core.req` to read `pymongo >= 3.0, != 3.6.0`. - -## How to add a new component (`*.req`) file - -Occasionally, we will require a set of pypa projects for an entirely new piece of software in our -repository. This usually implies adding a new component file. For example, say that we need to add -a logging system to both local development and evergreen. This system requires the fictional pypa -project `FooLog`. So we add a file `foolog.req` and require it from both `dev-requirements.txt` and -`evgtest-requirements.txt`. Like the majority of our components, we want it in the toolchain, so we -also add it to `toolchain-requirements.txt`. The workflow will usually look like: - -``` -$ # Make the component file -$ echo "FooLog" >etc/pip/components/foolog.req -$ # Require the component from the requirements files -$ echo "-r components/foolog.req" >>etc/pip/dev-requirements.txt -$ echo "-r components/foolog.req" >>etc/pip/evgtest-requirements.txt -$ echo "-r components/foolog.req" >>etc/pip/toolchain-requirements.txt -``` - -## How to add a new requirements (`*-requirements.txt`) file - -Rarely, we will have an entirely new domain of requirements that is useful. In this case, we need to -at least make a new requirements file. For example, say we want to make a requirements file for -packaging our code. We would need most of the requirements for `dev-requirements.txt` but the -testing has already been done in our continuous integration. So we create a new file -`package-requirements.txt` and require a smaller subset of components. The new file at -`etc/pip/package-requirements.txt` would look like this: -``` --r components/platform.req --r components/core.req - --r components/compile.req --r components/lint.req -``` diff --git a/etc/pip/compile-requirements.txt b/etc/pip/compile-requirements.txt deleted file mode 100644 index 96fe580a637..00000000000 --- a/etc/pip/compile-requirements.txt +++ /dev/null @@ -1,6 +0,0 @@ --r components/platform.req --r components/core.req - --r components/compile.req - --r components/tooling_metrics.req diff --git a/etc/pip/components/aws.req b/etc/pip/components/aws.req deleted file mode 100644 index 94c132729e7..00000000000 --- a/etc/pip/components/aws.req +++ /dev/null @@ -1,2 +0,0 @@ -boto3 <= 1.20.26 -botocore <= 1.23.26 diff --git a/etc/pip/components/build_metrics.req b/etc/pip/components/build_metrics.req deleted file mode 100644 index 288240c805b..00000000000 --- a/etc/pip/components/build_metrics.req +++ /dev/null @@ -1,5 +0,0 @@ -psutil -jsonschema -memory_profiler -puremagic -tabulate diff --git a/etc/pip/components/compile.req b/etc/pip/components/compile.req deleted file mode 100644 index 1ef0f56a10d..00000000000 --- a/etc/pip/components/compile.req +++ /dev/null @@ -1,6 +0,0 @@ -# Mongo compile -Cheetah3 <= 3.2.6.post1 # src/mongo/base/generate_error_codes.py -packaging <= 21.3 -regex <= 2021.11.10 -requirements_parser <= 0.3.1 -setuptools diff --git a/etc/pip/components/core.req b/etc/pip/components/core.req deleted file mode 100644 index 93d6728ec7a..00000000000 --- a/etc/pip/components/core.req +++ /dev/null @@ -1,7 +0,0 @@ -# Core (we need these for most buildscripts) -psutil <= 5.8.0 -pymongo == 4.3.3 -PyYAML == 5.3.1 # Pinned due to SERVER-79126 and linked BF -types-PyYAML ~= 6.0.12.10 -requests >= 2.0.0, <= 2.26.0 -typing-extensions >= 3.7.4 diff --git a/etc/pip/components/evergreen.req b/etc/pip/components/evergreen.req deleted file mode 100644 index dbf22a50bd1..00000000000 --- a/etc/pip/components/evergreen.req +++ /dev/null @@ -1,6 +0,0 @@ -click ~= 7.0 -dataclasses; python_version < "3.7" -inject ~= 4.3.1 -GitPython ~= 3.1.7 -pydantic ~= 1.8.2 -structlog ~= 23.1.0 diff --git a/etc/pip/components/external_auth.req b/etc/pip/components/external_auth.req deleted file mode 100644 index c267d2cba79..00000000000 --- a/etc/pip/components/external_auth.req +++ /dev/null @@ -1,10 +0,0 @@ -# These are the dependencies of ldaptor -passlib == 1.7.4 -pyOpenSSL == 19.0.0; platform_machine == "s390x" or platform_machine == "ppc64le" # Needed for pinned cryptography package - see SERVER-70845 -pyOpenSSL == 22.0.0; platform_machine != "s390x" and platform_machine != "ppc64le" -pyparsing == 2.4.0 -service_identity == 18.1.0 -twisted == 21.2.0 -zope.interface == 5.0.0 - -ldaptor == 19.0.0 diff --git a/etc/pip/components/idl.req b/etc/pip/components/idl.req deleted file mode 100644 index 13ad323f0cd..00000000000 --- a/etc/pip/components/idl.req +++ /dev/null @@ -1,2 +0,0 @@ -unittest-xml-reporting >= 2.2.0, <= 3.0.4 -packaging <= 21.3 diff --git a/etc/pip/components/jiraclient.req b/etc/pip/components/jiraclient.req deleted file mode 100644 index 760a5c46684..00000000000 --- a/etc/pip/components/jiraclient.req +++ /dev/null @@ -1,5 +0,0 @@ -# TIG jira integration -jira <= 3.1.1 -requests-oauth <= 0.4.1 -PyJWT <= 2.3.0 # https://github.com/pycontribs/jira/issues/247 -# We are omitting pycrypto based on https://github.com/pycontribs/jira/pull/629 diff --git a/etc/pip/components/libdeps.req b/etc/pip/components/libdeps.req deleted file mode 100644 index 6c95544ab69..00000000000 --- a/etc/pip/components/libdeps.req +++ /dev/null @@ -1,9 +0,0 @@ -networkx -flask -flask_cors -lxml -eventlet -gevent -progressbar2 -cxxfilt -pympler diff --git a/etc/pip/components/lint.req b/etc/pip/components/lint.req deleted file mode 100644 index a0265d6073b..00000000000 --- a/etc/pip/components/lint.req +++ /dev/null @@ -1,13 +0,0 @@ -# Linters -# Note: These versions are checked by python modules in buildscripts/linter/ -GitPython ~= 3.1.31 -mypy ~= 1.3.0 -pydocstyle == 6.3.0 -pylint == 2.17.4 -structlog ~= 23.1.0 -yamllint == 1.32.0 -yapf == 0.26.0 # latest is 0.40.1, but that causes CI failures -types-setuptools == 57.4.12 # latest is 68.0.0.0, but that causes pip install requirements to fail -types-requests == 2.31.0.1 -tqdm -colorama diff --git a/etc/pip/components/platform.req b/etc/pip/components/platform.req deleted file mode 100644 index e14765ddf0a..00000000000 --- a/etc/pip/components/platform.req +++ /dev/null @@ -1,9 +0,0 @@ -# Platform-specific components -pypiwin32>=223; sys_platform == "win32" and python_version > "3" -pywin32>=225; sys_platform == "win32" and python_version > "3" - -cryptography == 2.3; platform_machine == "s390x" or platform_machine == "ppc64le" # Needed for oauthlib to use RSAAlgorithm # Version locked - see SERVER-36618 -cryptography == 36.0.2; platform_machine != "s390x" and platform_machine != "ppc64le" - -mongo-ninja-python == 1.11.1.5; (platform_machine == "x86_64" or platform_machine == "aarch64") and sys_platform == "linux" -ninja >= 1.10.0; (platform_machine != "x86_64" and platform_machine != "aarch64") or sys_platform != "linux" diff --git a/etc/pip/components/testing.req b/etc/pip/components/testing.req deleted file mode 100644 index 28ac8c06817..00000000000 --- a/etc/pip/components/testing.req +++ /dev/null @@ -1,34 +0,0 @@ -curatorbin == 1.2.3 -PyKMIP == 0.10.0 -evergreen.py == 3.4.4 -jinja2 <= 2.11.3 -MarkupSafe == 1.1.0 # See SERVER-57036, this is a transitive dependency of jinja2 -mock <= 4.0.3 -shrub.py == 1.1.4 -ocspresponder == 0.5.0 -flask == 1.1.1 -itsdangerous == 2.0.0 -ocspbuilder == 0.10.2 -Werkzeug == 2.0.3 -blackduck == 1.0.1 -PyGithub == 1.53 -urllib3 >= 1.26.0, <= 1.26.7 -distro == 1.5.0 -dnspython == 2.1.0 -proxy-protocol == 0.7.5 -pkce == 1.0.3 -oauthlib == 3.1.1 -requests-oauthlib == 1.3.0 -packaging <= 21.3 -docker -mongomock == 4.1.2 -pyjwt -selenium -geckodriver-autoinstaller -pipx==1.2.0 -pigz-python -opentelemetry-api -opentelemetry-sdk -# TODO: EVG-20576 -# Once the above is merged we can get rid of our dependency on grpc -opentelemetry-exporter-otlp-proto-grpc; platform_machine != "darwin" # TODO: SERVER-80336 this should work on macosx diff --git a/etc/pip/components/tooling_metrics.req b/etc/pip/components/tooling_metrics.req deleted file mode 100644 index 09c4ba3f77e..00000000000 --- a/etc/pip/components/tooling_metrics.req +++ /dev/null @@ -1 +0,0 @@ -mongo-tooling-metrics == 1.0.8 diff --git a/etc/pip/core-requirements.txt b/etc/pip/core-requirements.txt deleted file mode 100644 index daa77546015..00000000000 --- a/etc/pip/core-requirements.txt +++ /dev/null @@ -1,2 +0,0 @@ --r components/platform.req --r components/core.req diff --git a/etc/pip/dev-requirements.txt b/etc/pip/dev-requirements.txt deleted file mode 100644 index 23282cbf431..00000000000 --- a/etc/pip/dev-requirements.txt +++ /dev/null @@ -1,12 +0,0 @@ --r components/platform.req --r components/core.req - --r components/compile.req --r components/lint.req --r components/testing.req --r components/external_auth.req --r components/evergreen.req --r components/aws.req --r components/jiraclient.req --r components/build_metrics.req --r components/tooling_metrics.req diff --git a/etc/pip/evgtest-requirements.txt b/etc/pip/evgtest-requirements.txt deleted file mode 100644 index db54984bf5b..00000000000 --- a/etc/pip/evgtest-requirements.txt +++ /dev/null @@ -1,7 +0,0 @@ --r components/platform.req --r components/core.req - --r components/testing.req --r components/aws.req --r components/idl.req --r components/evergreen.req diff --git a/etc/pip/external-auth-requirements.txt b/etc/pip/external-auth-requirements.txt deleted file mode 100644 index 1ba79f29bde..00000000000 --- a/etc/pip/external-auth-requirements.txt +++ /dev/null @@ -1 +0,0 @@ --r components/external_auth.req diff --git a/etc/pip/jira-requirements.txt b/etc/pip/jira-requirements.txt deleted file mode 100644 index d18d5b36356..00000000000 --- a/etc/pip/jira-requirements.txt +++ /dev/null @@ -1,4 +0,0 @@ --r components/platform.req --r components/core.req - --r components/jiraclient.req diff --git a/etc/pip/libdeps-requirements.txt b/etc/pip/libdeps-requirements.txt deleted file mode 100644 index 4b74c044044..00000000000 --- a/etc/pip/libdeps-requirements.txt +++ /dev/null @@ -1 +0,0 @@ --r components/libdeps.req diff --git a/etc/pip/lint-requirements.txt b/etc/pip/lint-requirements.txt deleted file mode 100644 index da0d870067c..00000000000 --- a/etc/pip/lint-requirements.txt +++ /dev/null @@ -1,4 +0,0 @@ --r components/platform.req --r components/core.req - --r components/lint.req diff --git a/etc/pip/powercycle-requirements.txt b/etc/pip/powercycle-requirements.txt deleted file mode 100644 index a535a9422ce..00000000000 --- a/etc/pip/powercycle-requirements.txt +++ /dev/null @@ -1,7 +0,0 @@ --r components/platform.req --r components/core.req --r components/evergreen.req --r components/testing.req - --r components/aws.req --r components/tooling_metrics.req diff --git a/etc/pip/toolchain-requirements.txt b/etc/pip/toolchain-requirements.txt deleted file mode 100644 index 27c792e52e1..00000000000 --- a/etc/pip/toolchain-requirements.txt +++ /dev/null @@ -1,21 +0,0 @@ -# This file is specifically intended to pull in *all* of our -# requirements. - --r components/core.req - --r components/compile.req --r components/evergreen.req --r components/lint.req --r components/testing.req --r components/idl.req - --r components/aws.req --r components/external_auth.req --r components/jiraclient.req - --r components/platform.req - --r components/build_metrics.req --r components/libdeps.req - --r components/tooling_metrics.req diff --git a/etc/system_perf.yml b/etc/system_perf.yml index d9c404f2f39..192c58cacbd 100755 --- a/etc/system_perf.yml +++ b/etc/system_perf.yml @@ -293,10 +293,13 @@ functions: mkdir -p mongodb/bin - /opt/mongodbtoolchain/v4/bin/virtualenv --python /opt/mongodbtoolchain/v4/bin/python3 "${workdir}/compile_venv" + # This is copied from evergreen/functions/venv_setup.sh + # Consider consolidating this in the future + /opt/mongodbtoolchain/v4/bin/python3 -m venv "${workdir}/compile_venv" source "${workdir}/compile_venv/bin/activate" - python -m pip install -r etc/pip/compile-requirements.txt + python -m pip install "poetry==1.5.1" + python -m poetry install --no-root --sync - command: expansions.write params: file: expansions.yml diff --git a/evergreen/compile_venv_dependency_check.sh b/evergreen/compile_venv_dependency_check.sh deleted file mode 100644 index 62cbded170d..00000000000 --- a/evergreen/compile_venv_dependency_check.sh +++ /dev/null @@ -1,12 +0,0 @@ -# Quick check to ensure all scons.py dependecies have been added to compile-requirements.txt -set -o errexit -set -o verbose - -# Create virtual env -/opt/mongodbtoolchain/v4/bin/virtualenv --python /opt/mongodbtoolchain/v4/bin/python3 ./compile_venv -source ./compile_venv/bin/activate - -# Try printing scons.py help message -cd src -python -m pip install -r etc/pip/compile-requirements.txt -buildscripts/scons.py --help diff --git a/evergreen/external_auth_aws_pip.sh b/evergreen/external_auth_aws_pip.sh deleted file mode 100755 index 1395fa6698e..00000000000 --- a/evergreen/external_auth_aws_pip.sh +++ /dev/null @@ -1,19 +0,0 @@ -DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" > /dev/null 2>&1 && pwd)" -. "$DIR/prelude.sh" - -set -o errexit -set -o verbose -activate_venv - -# Not all git get project calls clone into ${workdir}/src so we allow -# callers to tell us where the pip requirements files are. -pip_dir="${pip_dir}" -if [[ -z $pip_dir ]]; then - # Default to most common location - pip_dir="${workdir}/src/etc/pip" -fi - -# Same as above we have to use quotes to preserve the -# Windows path separator -external_auth_txt="$pip_dir/components/aws.req" -python -m pip install -r "$external_auth_txt" diff --git a/evergreen/external_auth_pip.sh b/evergreen/external_auth_pip.sh deleted file mode 100755 index 8f1eea5919c..00000000000 --- a/evergreen/external_auth_pip.sh +++ /dev/null @@ -1,19 +0,0 @@ -DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" > /dev/null 2>&1 && pwd)" -. "$DIR/prelude.sh" - -set -o errexit -set -o verbose -activate_venv - -# Not all git get project calls clone into ${workdir}/src so we allow -# callers to tell us where the pip requirements files are. -pip_dir="${pip_dir}" -if [[ -z $pip_dir ]]; then - # Default to most common location - pip_dir="${workdir}/src/etc/pip" -fi - -# Same as above we have to use quotes to preserve the -# Windows path separator -external_auth_txt="$pip_dir/external-auth-requirements.txt" -python -m pip install -r "$external_auth_txt" diff --git a/evergreen/functions/venv_setup.sh b/evergreen/functions/venv_setup.sh index fbf1c519d65..fb081689721 100644 --- a/evergreen/functions/venv_setup.sh +++ b/evergreen/functions/venv_setup.sh @@ -6,6 +6,8 @@ evergreen_dir="$(cd "$(dirname "${BASH_SOURCE[0]}")" > /dev/null 2>&1 && pwd)/.. . "$evergreen_dir/prelude_python.sh" python_loc=$(which ${python}) +echo "python_loc set to $python_loc" + venv_dir="${workdir}/venv" if [ -d "$venv_dir" ]; then exit 0 @@ -54,18 +56,6 @@ fi export VIRTUAL_ENV_DISABLE_PROMPT=yes -# Not all git get project calls clone into ${workdir}/src so we allow -# callers to tell us where the pip requirements files are. -pip_dir="${pip_dir}" -if [[ -z $pip_dir ]]; then - # Default to most common location - pip_dir="${workdir}/src/etc/pip" -fi - -# Same as above we have to use quotes to preserve the -# Windows path separator -toolchain_txt="$pip_dir/toolchain-requirements.txt" - # the whole prelude cannot be imported because it requires pyyaml to be # installed, which happens just below. . "$evergreen_dir/prelude_venv.sh" @@ -78,6 +68,7 @@ echo "Upgrading pip to 21.0.1" # By retrying we would like to only see errors that happen consistently for i in {1..5}; do python -m pip --disable-pip-version-check install "pip==21.0.1" "wheel==0.37.0" && RET=0 && break || RET=$? && sleep 1 + echo "Python failed to install pip and wheel, retrying..." done if [ $RET -ne 0 ]; then @@ -85,16 +76,44 @@ if [ $RET -ne 0 ]; then exit $RET fi +# Loop 5 times to retry the poetry install +# We have seen weird network errors that can sometimes mess up the pip install +# By retrying we would like to only see errors that happen consistently +for i in {1..5}; do + if [ "Windows_NT" = "$OS" ]; then + # Windows has a bug where reinstalling charset-normalizer fails since it is being used at the same time it is being uninstalled + # We need to install the same version that is pinned in poetry + python -m pip install "poetry==1.5.1" "charset-normalizer==2.0.12" && RET=0 && break || RET=$? && sleep 1 + elif uname -a | grep -q 's390x\|ppc64le'; then + # s390x and ppc64le both require these old versions for some reason + # They are pinned deps as well + python -m pip install "poetry==1.5.1" "cryptography==2.3" "pyOpenSSL==19.0.0" && RET=0 && break || RET=$? && sleep 1 + else + python -m pip install "poetry==1.5.1" && RET=0 && break || RET=$? && sleep 1 + fi + echo "Python failed to install poetry, retrying..." +done + +if [ $RET -ne 0 ]; then + echo "Pip install error for poetry" + exit $RET +fi + +cd src + # Loop 5 times to retry full venv install # We have seen weird network errors that can sometimes mess up the pip install # By retrying we would like to only see errors that happen consistently for i in {1..5}; do - python -m pip --disable-pip-version-check install -r "$toolchain_txt" -q --log install.log && RET=0 && break || RET=$? && sleep 1 + python -m poetry install --no-root --sync && RET=0 && break || RET=$? && sleep 1 + echo "Python failed install required deps with poetry, retrying..." done if [ $RET -ne 0 ]; then - echo "Pip install error for full venv: $toolchain_txt" - cat install.log || true + echo "Poetry install error for full venv" exit $RET fi + +cd .. + python -m pip freeze > pip-requirements.txt diff --git a/evergreen/libdeps_setup.sh b/evergreen/libdeps_setup.sh index 06c9535ef81..38660c4367b 100755 --- a/evergreen/libdeps_setup.sh +++ b/evergreen/libdeps_setup.sh @@ -4,4 +4,20 @@ DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" > /dev/null 2>&1 && pwd)" cd src activate_venv -python -m pip install -r etc/pip/libdeps-requirements.txt + +# Loop 5 times to retry libdeps install +# We have seen weird network errors that can sometimes mess up the pip install +# By retrying we would like to only see errors that happen consistently +for i in {1..5}; do + python -m poetry install --no-root --sync -E libdeps && RET=0 && break || RET=$? && sleep 1 +done + +if [ $RET -ne 0 ]; then + echo "Poetry install error for libdeps addition to venv" + exit $RET +fi + +cd .. + +# Overwrite pip-requirements since this is installing additional requirements +python -m pip freeze > pip-requirements.txt diff --git a/evergreen/prelude_venv.sh b/evergreen/prelude_venv.sh index a4e9318375e..c93c8ba0216 100644 --- a/evergreen/prelude_venv.sh +++ b/evergreen/prelude_venv.sh @@ -18,6 +18,7 @@ function activate_venv { exit 1 fi python=${python} + echo "Could not find venv. Setting python to $python." fi if [ "Windows_NT" = "$OS" ]; then @@ -42,5 +43,5 @@ function activate_venv { python -c "import sys; print(sys.path)" fi - echo "python set to $(which $python)" + echo "python set to $(which $python) and python version: $($python --version)" } diff --git a/poetry.lock b/poetry.lock new file mode 100644 index 00000000000..c011c65a556 --- /dev/null +++ b/poetry.lock @@ -0,0 +1,4214 @@ +# This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand. + +[[package]] +name = "argcomplete" +version = "3.1.1" +description = "Bash tab completion for argparse" +optional = false +python-versions = ">=3.6" +files = [ + {file = "argcomplete-3.1.1-py3-none-any.whl", hash = "sha256:35fa893a88deea85ea7b20d241100e64516d6af6d7b0ae2bed1d263d26f70948"}, + {file = "argcomplete-3.1.1.tar.gz", hash = "sha256:6c4c563f14f01440aaffa3eae13441c5db2357b5eec639abe7c0b15334627dff"}, +] + +[package.extras] +test = ["coverage", "mypy", "pexpect", "ruff", "wheel"] + +[[package]] +name = "asn1crypto" +version = "1.5.1" +description = "Fast ASN.1 parser and serializer with definitions for private keys, public keys, certificates, CRL, OCSP, CMS, PKCS#3, PKCS#7, PKCS#8, PKCS#12, PKCS#5, X.509 and TSP" +optional = false +python-versions = "*" +files = [ + {file = "asn1crypto-1.5.1-py2.py3-none-any.whl", hash = "sha256:db4e40728b728508912cbb3d44f19ce188f218e9eba635821bb4b68564f8fd67"}, + {file = "asn1crypto-1.5.1.tar.gz", hash = "sha256:13ae38502be632115abf8a24cbe5f4da52e3b5231990aff31123c805306ccb9c"}, +] + +[[package]] +name = "astroid" +version = "2.15.6" +description = "An abstract syntax tree for Python with inference support." +optional = false +python-versions = ">=3.7.2" +files = [ + {file = "astroid-2.15.6-py3-none-any.whl", hash = "sha256:389656ca57b6108f939cf5d2f9a2a825a3be50ba9d589670f393236e0a03b91c"}, + {file = "astroid-2.15.6.tar.gz", hash = "sha256:903f024859b7c7687d7a7f3a3f73b17301f8e42dfd9cc9df9d4418172d3e2dbd"}, +] + 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"flask-cors", "gevent", "lxml", "progressbar2", "pympler"] + +[metadata] +lock-version = "2.0" +python-versions = ">=3.9,<4.0" +content-hash = "0a031cece68e92362cc2e3351a7255593bfdf9ce994572f87bcf4b2bfb991f90" diff --git a/pyproject.toml b/pyproject.toml new file mode 100644 index 00000000000..bff2dff54ec --- /dev/null +++ b/pyproject.toml @@ -0,0 +1,171 @@ +[tool.poetry] +name = "mdb-python-deps" +version = "1.0.0" +description = "MongoDB python dependencies" +authors = ["MongoDB"] +readme = "README.md" +# These packages are included as a TODO if we want to run resmoke with pex +# Currently this does nothing +packages = [ + {include = "buildscripts/resmoke.py"}, + {include = "buildscripts/mongosymb.py"}, + {include = "buildscripts/build_system_options.py"}, + {include = "buildscripts/resmokelib"}, + {include = "buildscripts/idl"}, + {include = "buildscripts/util"} +] + +[tool.poetry.dependencies] +python = ">=3.9,<4.0" +# OPTIONAL +# Libdeps depdencies +networkx = "*" # This is also used as a part of build_metrics so it is sort of required +flask = { version = "*", optional = true } +flask-cors = { version = "*", optional = true } +lxml = { version = "*", optional = true } +eventlet = { version = "*", optional = true } +gevent = { version = "*", optional = true } +progressbar2 = { version = "*", optional = true } +cxxfilt = { version = "*", optional = true } +pympler = { version = "*", optional = true } + +[tool.poetry.group.aws.dependencies] +boto3 = "<=1.20.26" +botocore = "<=1.23.26" + +[tool.poetry.group.build-metrics.dependencies] +jsonschema = "^4.17.3" +psutil = "^5.8.0" +memory-profiler = "^0.61.0" +puremagic = "^1.15" +tabulate = "^0.9.0" + +[tool.poetry.group.compile.dependencies] +cheetah3 = "<=3.2.6.post1" # src/mongo/base/generate_error_codes.py +packaging = "<=21.3" +regex = "<=2021.11.10" +requirements_parser = "<=0.3.1" +setuptools = "58.1.0" + +[tool.poetry.group.core.dependencies] +psutil = "5.8.0" +pymongo = "4.3.3" +PyYAML = "5.3.1" +types-PyYAML = "~6.0.12.10" +requests = "2.26.0" +typing-extensions = ">3.7.4" + +[tool.poetry.group.export.dependencies] +pipx = "1.2.0" +# TODO: Add in pex as we move forward with this +# pex = "^2.1.137" +poetry = "*" + +[tool.poetry.group.evergreen.dependencies] +click = "^7.1.2" +inject = "~4.3.1" +GitPython = "~3.1.7" +pydantic = "~1.8.2" +structlog = "~23.1.0" + +[tool.poetry.group.external-auth.dependencies] +# These are the dependencies of ldaptor +passlib = "1.7.4" +pyOpenSSL = [ + { version = "19.0.0", markers = "platform_machine == 's390x' or platform_machine == 'ppc64le'" }, # Needed for pinned cryptography package - see SERVER-70845 + { version = "22.0.0", markers = "platform_machine != 's390x' and platform_machine != 'ppc64le'" }, +] +pyparsing = "2.4.0" +service_identity = "18.1.0" +twisted = "21.2.0" +'zope.interface' = "5.0.0" +ldaptor = "19.0.0" + +[tool.poetry.group.idl.dependencies] +unittest-xml-reporting = "3.0.4" +packaging = "21.3" + +[tool.poetry.group.jira-client.dependencies] +jira = "<=3.1.1" +requests-oauth = "<=0.4.1" +PyJWT = "<=2.3.0" # https://github.com/pycontribs/jira/issues/247 +# We are omitting pycrypto based on https://github.com/pycontribs/jira/pull/629 + +[tool.poetry.group.lint.dependencies] +# Note: These versions are checked by python modules in buildscripts/linter/ +GitPython = "~3.1.7" +mypy = "~1.3.0" +pydocstyle = "6.3.0" +pylint = "2.17.4" +structlog = "~23.1.0" +yamllint = "1.32.0" +yapf = "0.26.0" # latest is 0.40.1, but that causes CI failures +types-setuptools = "57.4.12" # latest is 68.0.0.0, but that causes pip install requirements to fail +types-requests = "2.31.0.1" +tqdm = "*" +colorama = "0.4.6" + +[tool.poetry.group.platform.dependencies] +pypiwin32 = {version = ">=223", markers = "platform_machine == 'win32'"} +pywin32 = {version = ">=225", markers = "platform_machine == 'win32'"} +cryptography = [ + { version = "2.3", markers = "platform_machine == 's390x' or platform_machine == 'ppc64le'" }, # Needed for oauthlib to use RSAAlgorithm # Version locked - see SERVER-36618 + { version = "36.0.2", markers = "platform_machine != 's390x' and platform_machine != 'ppc64le'" }, +] +mongo-ninja-python = [ + { version = "1.11.1.5", markers = "sys_platform == 'linux'" }, +] +ninja = [ + { version = ">=1.10.0", markers = "sys_platform != 'linux'" }, +] + +[tool.poetry.group.testing.dependencies] +curatorbin = "1.2.3" +PyKMIP = "0.10.0" +evergreen-py = "3.4.4" +jinja2 = "2.11.3" +MarkupSafe = "1.1.0" # See SERVER-57036, this is a transitive dependency of jinja2 +mock = "4.0.3" +shrub-py = "1.1.4" +ocspresponder = "0.5.0" +flask = "1.1.1" +itsdangerous = "2.0.0" +ocspbuilder = "0.10.2" +Werkzeug = "2.0.3" +blackduck = "1.0.1" +PyGithub = "1.53" +urllib3 = "1.26.7" +distro = "1.5.0" +dnspython = "2.1.0" +proxy-protocol = "0.7.5" +pkce = "1.0.3" +oauthlib = "3.1.1" +requests-oauthlib = "1.3.0" +packaging = "21.3" +docker = "^6.1.2" +mongomock = "4.1.2" +pyjwt = "<=2.3.0" +selenium = "^4.9.1" +geckodriver-autoinstaller = "^0.1.0" +pigz-python = "*" +opentelemetry-api = "*" +opentelemetry-sdk = "*" +# TODO: EVG-20576 +# Once the above is merged we can get rid of our dependency on grpc +opentelemetry-exporter-otlp-proto-grpc = [ { version = "*", markers = "platform_machine != 'darwin'" } ] # TODO: SERVER-80336 this should work on macosx + +[tool.poetry.group.tooling-metrics.dependencies] +mongo-tooling-metrics = "1.0.8" + +# This can be installed with "poetry install -E libdeps" +[tool.poetry.extras] +libdeps = ["flask", "flask-cors", "lxml", "eventlet", "gevent", "progressbar2", "cxxfilt", "pympler"] + +# This entrypoint is included as a TODO if we want to run resmoke with pex +# Currently this does nothing +[tool.poetry.scripts] +resmoke = "buildscripts.resmoke:entrypoint" + +[build-system] +requires = ["poetry-core"] +build-backend = "poetry.core.masonry.api" diff --git a/site_scons/mongo/pip_requirements.py b/site_scons/mongo/pip_requirements.py index e8f26db086e..e911e98fd4a 100644 --- a/site_scons/mongo/pip_requirements.py +++ b/site_scons/mongo/pip_requirements.py @@ -5,6 +5,8 @@ # should be used for finding such external modules or # missing dependencies. import sys +import subprocess +import re class MissingRequirements(Exception): @@ -12,7 +14,7 @@ class MissingRequirements(Exception): pass -def verify_requirements(requirements_file: str, silent: bool = False, executable=sys.executable): +def verify_requirements(silent: bool = False, executable=sys.executable): """Check if the modules in a pip requirements file are installed. This allows for a more friendly user message with guidance on how to resolve the missing dependencies. @@ -32,40 +34,36 @@ def verify_requirements(requirements_file: str, silent: bool = False, executable f"Try running:\n" f" {executable} -m pip install {pip_pkg}") from ex - # Import the prequisites for this function, providing hints on failure. + # Import poetry. If this fails then we know the next function will fail. + # This is so the user will have an easier time diagnosing the problem try: - import requirements + import poetry except ModuleNotFoundError as ex: - raiseSuggestion(ex, "requirements_parser") - - try: - import pkg_resources - except ModuleNotFoundError as ex: - raiseSuggestion(ex, "setuptools") + raiseSuggestion(ex, "'poetry==1.5.1'") verbose("Checking required python packages...") - # Reduce a pip requirements file to its PEP 508 requirement specifiers. - with open(requirements_file) as fd: - pip_lines = [p.line for p in requirements.parse(fd)] - - # The PEP 508 requirement specifiers can be parsed by the `pkg_resources`. - pkg_requirements = list(pkg_resources.parse_requirements(pip_lines)) + poetry_dry_run_proc = subprocess.run( + [executable, "-m", "poetry", "install", "--no-root", "--sync", "--dry-run"], check=True, + capture_output=True, text=True) + # String match should look like the following + # Package operations: 2 installs, 3 updates, 0 removals, 165 skipped + match = re.search(r"Package operations: (\d+) \w+, (\d+) \w+, (\d+) \w+, (\d+) \w+", + poetry_dry_run_proc.stdout) verbose("Requirements list:") - for req in sorted(set([str(req) for req in pkg_requirements])): - verbose(f" {req}") - - # Resolve all the requirements at once. - # This should help expose dependency hell among the requirements. - try: - dists = pkg_resources.working_set.resolve(pkg_requirements) - except pkg_resources.ResolutionError as ex: - raiseSuggestion( - ex, - f"-r {requirements_file}", - ) - - verbose("Resolved to these distributions:") - for dist in sorted(set([f" {dist.key} {dist.version}" for dist in dists])): - verbose(dist) + verbose(poetry_dry_run_proc.stdout) + installs = int(match[1]) + updates = int(match[2]) + removals = int(match[3]) + if updates == 1 and sys.platform == 'win32' and "Updating pywin32" in poetry_dry_run_proc.stdout: + # We have no idea why pywin32 thinks it needs to be updated + # We could use some more investigation into this + verbose( + "Windows detected a single update to pywin32 which is known to be buggy. Continuing.") + elif installs + updates + removals > 0: + raise MissingRequirements( + f"Detected one or more packages are out of date. " + f"Try running:\n" + f" export PYTHON_KEYRING_BACKEND=keyring.backends.null.Keyring\n" + f" {executable} -m poetry install --no-root --sync") diff --git a/site_scons/site_tools/mongo_pretty_printer_tests.py b/site_scons/site_tools/mongo_pretty_printer_tests.py index b45e786a7ff..d72570e645c 100644 --- a/site_scons/site_tools/mongo_pretty_printer_tests.py +++ b/site_scons/site_tools/mongo_pretty_printer_tests.py @@ -122,7 +122,7 @@ def build_pretty_printer_test(env, target, **kwargs): "gdb.execute('set confirm off')", "gdb.execute('source .gdbinit')", "try:", - " verify_requirements('etc/pip/components/core.req', executable=f'@python_executable@')", + " verify_requirements(executable=f'@python_executable@')", "except MissingRequirements as ex:", " print(ex)", " print('continuing testing anyways!')",